Factsheet for Zm00001d011527_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03393	Sorghum	nucleus	77.29	78.05
Zm00001d043950_P001	Maize	nucleus	71.26	77.43
TraesCS3D01G242500.1	Wheat	nucleus	55.07	62.3
HORVU3Hr1G060500.1	Barley	nucleus	54.11	61.54
TraesCS3B01G270500.1	Wheat	nucleus	54.59	61.41
TraesCS3A01G242500.1	Wheat	nucleus	53.62	60.82
Zm00001d039032_P001	Maize	nucleus	48.79	49.51
GSMUA_Achr3P31310_001	Banana	nucleus	26.33	47.6
GSMUA_Achr7P25400_001	Banana	nucleus	29.95	38.04
GSMUA_Achr6P22160_001	Banana	nucleus	31.64	37.32
GSMUA_Achr1P04770_001	Banana	nucleus	26.57	37.16
Zm00001d044162_P001	Maize	nucleus	31.4	36.93
Zm00001d011413_P001	Maize	nucleus	30.43	35.1
Solyc02g071130.2.1	Tomato	nucleus	26.33	34.38
PGSC0003DMT400025113	Potato	nucleus	26.33	34.28
GSMUA_Achr4P14990_001	Banana	nucleus	27.29	34.04
Zm00001d049173_P001	Maize	nucleus	18.36	33.19
Zm00001d007329_P001	Maize	nucleus	17.39	32.73
GSMUA_Achr4P02800_001	Banana	nucleus	25.85	32.52
Zm00001d034073_P001	Maize	nucleus	25.85	32.33
Zm00001d018656_P001	Maize	nucleus	24.88	31.02
Zm00001d011133_P001	Maize	plastid	14.49	30.61
Zm00001d038761_P002	Maize	nucleus	15.7	29.82
Zm00001d037607_P001	Maize	nucleus	14.01	29.74
Zm00001d043663_P001	Maize	plastid	14.73	28.91
Zm00001d017444_P001	Maize	extracellular, vacuole	15.7	28.14
Zm00001d051328_P002	Maize	nucleus	15.94	28.09
Zm00001d038843_P001	Maize	plastid	14.73	27.6
Zm00001d010805_P001	Maize	nucleus	15.22	27.51
Zm00001d012789_P001	Maize	nucleus	14.98	27.31
Zm00001d009939_P001	Maize	nucleus	13.04	26.34
GSMUA_Achr4P07920_001	Banana	nucleus	29.95	25.46
Zm00001d008793_P001	Maize	nucleus	14.01	25.33
Zm00001d002794_P001	Maize	nucleus	16.91	24.65
Zm00001d039584_P001	Maize	nucleus	16.43	23.21
Zm00001d039531_P001	Maize	nucleus	14.98	22.71

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:AQK97130.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K7V474	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF83	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002209537
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d011527	EnsemblPlants:Zm00001d011527_P001	EnsemblPlants:Zm00001d011527_T001	SEG:seg

Description

WRKY-transcription factor 42Probable WRKY transcription factor 71

Coordinates

chr8:-:153565171..153568905

Molecular Weight (calculated)

43415.9 Da

IEP (calculated)

6.553

GRAVY (calculated)

-0.512

Length

414 amino acids

Sequence
(BLAST)

001: MSSGDFHYHD ELAALFAQRP APAGEMTMAL QQQAPAASWF ADYLHAGAPG MGMDMDYDLL CRALDLPVPG DEDGVVKREL LLVADTGGGG GGFAAPLTPN
101: TTSSMSSSSS EAAGAAAGGG GGGSFGAAEE ESQSLGRCKK EDDGDGEESK DKEAMKGEED DADTGKKGSA AGKGKGKGEK RQRQPRIAFM TKSEVDHLED
201: GYRWRKYGQK AVKNSPYPRS YYRCTTQRCP VKKRVERSHQ DPAVVITTYE GKHTHPIPST LRGSSTHLLA AQLHHHHHHN IVGAFPPPPP PPQTMCLPFV
301: GRTGDGGGVI DMLGLCLPPR NHAAVPPAAT GLAPSPCCMS GPVGTVAGAT TTTAPTTTTV TTTTTSSPPP PPSLQTMQHF MAQDDFGLLQ DMLPSSSSSL
401: SFVVHSNGSN VQLP

Best Arabidopsis Sequence Match ( AT4G18170.1 )
(BLAST)

001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP

Arabidopsis Description

WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.