Factsheet for HORVU3Hr1G060500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G242500.1	Wheat	nucleus	92.86	92.35
TraesCS3A01G242500.1	Wheat	nucleus	91.76	91.51
TraesCS3B01G270500.1	Wheat	nucleus	90.93	89.95
Zm00001d043950_P001	Maize	nucleus	60.71	58.01
EES03393	Sorghum	nucleus	64.01	56.83
Zm00001d011527_P001	Maize	nucleus	61.54	54.11
HORVU1Hr1G088300.1	Barley	nucleus	40.11	50.69
GSMUA_Achr3P31310_001	Banana	nucleus	28.57	45.41
GSMUA_Achr6P22160_001	Banana	nucleus	35.44	36.75
GSMUA_Achr1P04770_001	Banana	nucleus	28.85	35.47
HORVU0Hr1G003340.1	Barley	nucleus	27.47	35.09
GSMUA_Achr7P25400_001	Banana	nucleus	30.49	34.05
HORVU2Hr1G001780.1	Barley	nucleus	18.13	33.67
HORVU1Hr1G092130.1	Barley	nucleus	28.02	33.01
Solyc02g071130.2.1	Tomato	nucleus	28.57	32.81
PGSC0003DMT400025113	Potato	nucleus	28.57	32.7
GSMUA_Achr4P14990_001	Banana	nucleus	29.4	32.23
GSMUA_Achr4P02800_001	Banana	nucleus	29.12	32.22
HORVU5Hr1G096420.20	Barley	mitochondrion, nucleus	26.65	32.12
HORVU2Hr1G093350.3	Barley	nucleus	18.13	28.7
HORVU6Hr1G061940.1	Barley	nucleus	17.86	28.63
HORVU3Hr1G069660.1	Barley	nucleus	17.86	28.14
HORVU0Hr1G001430.1	Barley	plastid	16.48	27.52
HORVU3Hr1G067510.1	Barley	mitochondrion, plastid	15.38	26.42
HORVU1Hr1G027700.1	Barley	nucleus	14.29	26.13
GSMUA_Achr4P07920_001	Banana	nucleus	32.97	24.64
HORVU3Hr1G021120.1	Barley	nucleus, plastid	17.86	24.62
HORVU3Hr1G020140.1	Barley	mitochondrion	15.66	23.17
HORVU3Hr1G050590.3	Barley	nucleus	16.48	22.56
HORVU1Hr1G081570.1	Barley	plastid	17.31	20.59
HORVU1Hr1G080300.1	Barley	nucleus	15.66	20.43

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:AK358052	EMBL:AK366837	UniProt:F2D2E5	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU3Hr1G060500	EnsemblPlants:HORVU3Hr1G060500.1
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF79
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000200545A	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D2E5]

Coordinates

chrchr3H:-:460762240..460768227

Molecular Weight (calculated)

38726.5 Da

IEP (calculated)

8.252

GRAVY (calculated)

-0.666

Length

364 amino acids

Sequence
(BLAST)

001: MSGEFQFQDE LASLFTHRPG PGMQQQQQQE QQASWLADYL QTPMDYDLLC RALELPAEED VVKRELVVDT TPSALTPSAG GGTPNATSSM SSSSSEAGGG
101: LCAGEGDSAG RCKKEDGDGE EGKGGDEGDK TKKGSAAAAK GGKAGKGEKR PRQPRVAFMT KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTTQKCVV
201: KKRVERSFQD TAVVITTYEG KHTHPIPSAI RGSTHLLAAQ AAHLHHQHHA HLAMMPQMGM GGRAGSPFGR SSDVLGGLLQ PRGHHGMTPP IIGAGAGHQT
301: SIQGLAGSIS ATATATAPSP PSLQMQHFMA PDFGLLQDML PSFIHGAGSN NNNNQPSSPY GKLH

Best Arabidopsis Sequence Match ( AT1G29860.1 )
(BLAST)

001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES

Arabidopsis Description

WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.