Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G270500.1 | Wheat | nucleus | 97.27 | 96.74 |
| TraesCS3A01G242500.1 | Wheat | nucleus | 96.45 | 96.71 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 92.35 | 92.86 |
| Zm00001d043950_P001 | Maize | nucleus | 62.02 | 59.58 |
| EES03393 | Sorghum | nucleus | 65.85 | 58.78 |
| Zm00001d011527_P001 | Maize | nucleus | 62.3 | 55.07 |
| GSMUA_Achr3P31310_001 | Banana | nucleus | 28.69 | 45.85 |
| TraesCS1D01G351600.1 | Wheat | plastid | 16.39 | 44.44 |
| GSMUA_Achr1P04770_001 | Banana | nucleus | 29.78 | 36.82 |
| GSMUA_Achr6P22160_001 | Banana | nucleus | 34.97 | 36.47 |
| TraesCS2D01G262100.1 | Wheat | nucleus | 27.87 | 35.79 |
| GSMUA_Achr7P25400_001 | Banana | nucleus | 31.42 | 35.28 |
| PGSC0003DMT400025113 | Potato | nucleus | 30.33 | 34.91 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 29.23 | 34.52 |
| Solyc02g071130.2.1 | Tomato | nucleus | 29.78 | 34.38 |
| TraesCS3D01G226300.1 | Wheat | nucleus | 31.97 | 33.91 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 28.14 | 33.55 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 27.05 | 33.45 |
| GSMUA_Achr4P14990_001 | Banana | nucleus | 30.33 | 33.43 |
| GSMUA_Achr4P02800_001 | Banana | nucleus | 29.78 | 33.13 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 25.96 | 32.99 |
| TraesCS2D01G011700.1 | Wheat | nucleus | 18.31 | 32.52 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 18.85 | 31.08 |
| TraesCS2D01G390200.1 | Wheat | nucleus | 18.58 | 29.69 |
| TraesCS6D01G223900.1 | Wheat | cytosol | 18.03 | 27.97 |
| TraesCS3D01G248500.1 | Wheat | mitochondrion | 15.3 | 27.32 |
| TraesCS1D01G362900.1 | Wheat | nucleus, plastid | 16.39 | 27.27 |
| TraesCS1D01G363300.1 | Wheat | plastid | 16.39 | 26.91 |
| TraesCS1D01G122400.1 | Wheat | nucleus | 14.21 | 26.8 |
| TraesCS3D01G113200.1 | Wheat | nucleus | 16.12 | 26.46 |
| GSMUA_Achr4P07920_001 | Banana | nucleus | 33.06 | 24.85 |
| TraesCS3D01G118100.1 | Wheat | nucleus, plastid | 17.76 | 24.81 |
| TraesCS3D01G212700.1 | Wheat | nucleus | 16.12 | 24.69 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF83 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3D01G242500 | EnsemblPlants:TraesCS3D01G242500.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:-:337973644..337976012
Molecular Weight (calculated)
38543.3 Da
IEP (calculated)
8.479
GRAVY (calculated)
-0.647
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEFQFHDE LASLFTQRPG PGMQQQEQQA SWLADYLQTP MDYDLLCRAL ELPAAEDVVK RELVVDTTPS GGGALTPSAG GGTPNATSSM SSSSSEAGGG
101: LCAGEGDSAG RCKKEDGDGE DGKGGDEGDK SKKGSAAKGG KAGKGEKRPR QPRFAFMTKS EVDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCVVKK
201: RVERSFQDPA VVITTYEGKH THPIPSALRG STHLLAAQAA HLHHQHHGHL GMLPQMGMGG RAGSPFGRSS GGGIDVLGGL LQPRAHHGMT PPMIGAGAGH
301: QASTQGLPGS ISSVASATAS SPPSLQMQHF MAPDFGLLQD MLPSFIHGAG GNNNNNQPSS PYGKLH
101: LCAGEGDSAG RCKKEDGDGE DGKGGDEGDK SKKGSAAKGG KAGKGEKRPR QPRFAFMTKS EVDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCVVKK
201: RVERSFQDPA VVITTYEGKH THPIPSALRG STHLLAAQAA HLHHQHHGHL GMLPQMGMGG RAGSPFGRSS GGGIDVLGGL LQPRAHHGMT PPMIGAGAGH
301: QASTQGLPGS ISSVASATAS SPPSLQMQHF MAPDFGLLQD MLPSFIHGAG GNNNNNQPSS PYGKLH
001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
Arabidopsis Description
WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.