Factsheet for TraesCS3B01G270500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G242500.1	Wheat	nucleus	96.74	97.27
TraesCS3A01G242500.1	Wheat	nucleus	94.29	95.07
HORVU3Hr1G060500.1	Barley	nucleus	89.95	90.93
Zm00001d043950_P001	Maize	nucleus	61.14	59.06
EES03393	Sorghum	nucleus	64.67	58.05
Zm00001d011527_P001	Maize	nucleus	61.41	54.59
GSMUA_Achr3P31310_001	Banana	nucleus	28.53	45.85
GSMUA_Achr1P04770_001	Banana	nucleus	29.62	36.82
GSMUA_Achr6P22160_001	Banana	nucleus	35.05	36.75
TraesCS2B01G280300.1	Wheat	nucleus	28.26	36.49
GSMUA_Achr7P25400_001	Banana	nucleus	31.25	35.28
PGSC0003DMT400025113	Potato	nucleus	30.16	34.91
TraesCS5B01G399900.1	Wheat	nucleus	29.08	34.41
Solyc02g071130.2.1	Tomato	nucleus	29.62	34.38
TraesCS3B01G256000.1	Wheat	nucleus	31.79	33.81
TraesCS1B01G453200.1	Wheat	nucleus	26.36	33.8
TraesCS2B01G010500.1	Wheat	nucleus	18.75	33.66
GSMUA_Achr4P14990_001	Banana	nucleus	30.16	33.43
TraesCS1B01G453300.1	Wheat	nucleus	28.26	33.33
GSMUA_Achr4P02800_001	Banana	nucleus	29.62	33.13
TraesCS2B01G410400.1	Wheat	nucleus	18.21	29.26
TraesCS1B01G374900.1	Wheat	plastid	16.85	28.18
TraesCS3B01G277300.1	Wheat	plastid	15.22	28.0
TraesCS6B01G282500.1	Wheat	nucleus	17.93	27.97
TraesCS1B01G374700.1	Wheat	nucleus, plastid	16.85	27.8
TraesCS1B01G363200.1	Wheat	nucleus	17.12	27.51
TraesCS3B01G129900.1	Wheat	nucleus	16.03	26.58
GSMUA_Achr4P07920_001	Banana	nucleus	33.15	25.05
TraesCS3B01G135300.1	Wheat	nucleus, plastid	17.93	24.91
TraesCS3B01G240200.1	Wheat	nucleus	16.03	24.69

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF79	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS3B01G270500	EnsemblPlants:TraesCS3B01G270500.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:-:435958756..435960913

Molecular Weight (calculated)

38677.4 Da

IEP (calculated)

8.479

GRAVY (calculated)

-0.634

Length

368 amino acids

Sequence
(BLAST)

001: MSGEFQFHDE LASLFTQRPG PGMQQQEQQA SWLADYLQTP MDYDLLCRAL ELPAAEDVVK RELVVDTTPS GGALTPSGGG GTPNATSSMS SSSSEAGGGL
101: CAGEGDSAGR CKKEDGDGED GKGGDEGDKS KKGSSAAAKG GKAGKGEKRP RQPRFAFMTK SEVDHLEDGY RWRKYGQKAV KNSPYPRSYY RCTTQKCVVK
201: KRVERSFQDP AVVITTYEGK HTHPIPSALR GSTHLLAAQA AHLHHQHHGH LGMLPQMGMG GRAGSPFGRS SGGGIDVLGG LLQPRAHHGM TAPMAGAGAG
301: HQAPTQGLTG SIRSVASATA TASSPPSLQM QHFMAPDFGL LQDMLPSFIH GAGGNSDNQP SSPYGKLH

Best Arabidopsis Sequence Match ( AT1G29860.1 )
(BLAST)

001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES

Arabidopsis Description

WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.