Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G429900.1 | Wheat | nucleus | 89.74 | 91.21 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 55.13 | 82.69 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 81.09 | 81.88 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 75.0 | 81.25 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 71.79 | 78.05 |
| Os05t0583000-01 | Rice | nucleus | 45.51 | 42.14 |
| OQU78504 | Sorghum | nucleus | 34.62 | 41.22 |
| TraesCS3B01G256000.1 | Wheat | nucleus | 40.38 | 36.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.01 | 35.76 |
| VIT_12s0028g00270.t01 | Wine grape | nucleus | 30.77 | 30.87 |
| TraesCS2B01G010500.1 | Wheat | nucleus | 20.19 | 30.73 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 31.09 | 30.41 |
| Bra030178.1-P | Field mustard | nucleus | 26.92 | 30.32 |
| CDX98155 | Canola | nucleus | 27.56 | 30.28 |
| AT1G29860.1 | Thale cress | nucleus | 27.24 | 30.14 |
| Bra032340.1-P | Field mustard | nucleus | 26.28 | 30.04 |
| CDY26310 | Canola | nucleus | 26.28 | 30.04 |
| CDY43194 | Canola | nucleus | 26.6 | 29.96 |
| CDX99859 | Canola | nucleus | 25.96 | 29.67 |
| CDX76541 | Canola | nucleus | 27.24 | 28.91 |
| Bra040926.1-P | Field mustard | nucleus | 27.24 | 28.91 |
| TraesCS1B01G374900.1 | Wheat | plastid | 20.19 | 28.64 |
| CDX99495 | Canola | nucleus | 28.53 | 28.53 |
| TraesCS5B01G399900.1 | Wheat | nucleus | 28.21 | 28.3 |
| TraesCS3B01G270500.1 | Wheat | nucleus | 33.33 | 28.26 |
| CDY08894 | Canola | nucleus | 26.6 | 28.23 |
| KRH58435 | Soybean | nucleus | 32.37 | 28.21 |
| Bra012614.1-P | Field mustard | nucleus | 28.21 | 28.21 |
| CDX90417 | Canola | nucleus | 28.21 | 28.11 |
| CDY09083 | Canola | nucleus | 28.21 | 28.11 |
| TraesCS2B01G280300.1 | Wheat | nucleus | 25.64 | 28.07 |
| KRH14487 | Soybean | nucleus | 30.13 | 28.06 |
| TraesCS3B01G277300.1 | Wheat | plastid | 17.95 | 28.0 |
| TraesCS2B01G410400.1 | Wheat | nucleus | 20.51 | 27.95 |
| CDX78832 | Canola | nucleus | 27.56 | 27.92 |
| Bra013289.1-P | Field mustard | nucleus | 27.56 | 27.92 |
| KRH73639 | Soybean | nucleus | 30.13 | 27.89 |
| TraesCS1B01G374700.1 | Wheat | nucleus, plastid | 19.87 | 27.8 |
| CDY01523 | Canola | nucleus | 27.56 | 27.56 |
| TraesCS6B01G282500.1 | Wheat | nucleus | 20.83 | 27.54 |
| TraesCS1B01G363200.1 | Wheat | nucleus | 20.19 | 27.51 |
| AT4G18170.1 | Thale cress | nucleus | 27.88 | 27.36 |
| KRH42308 | Soybean | nucleus | 32.05 | 26.95 |
| TraesCS3B01G135300.1 | Wheat | nucleus, plastid | 21.47 | 25.28 |
| CDY43969 | Canola | nucleus | 25.64 | 25.24 |
| Bra022033.1-P | Field mustard | nucleus | 25.64 | 25.24 |
| CDY35159 | Canola | nucleus | 25.96 | 25.23 |
| CDY03224 | Canola | nucleus | 25.96 | 25.23 |
| CDX77655 | Canola | nucleus | 25.96 | 25.08 |
| Bra017561.1-P | Field mustard | nucleus | 25.64 | 24.92 |
| TraesCS3B01G129900.1 | Wheat | nucleus | 17.63 | 24.77 |
| CDY33471 | Canola | nucleus | 25.32 | 24.46 |
| Bra025021.1-P | Field mustard | nucleus | 25.32 | 24.46 |
| AT5G46350.1 | Thale cress | nucleus | 25.0 | 23.93 |
| TraesCS3B01G240200.1 | Wheat | nucleus | 16.67 | 21.76 |
| CDX87722 | Canola | nucleus | 21.15 | 21.09 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF52 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS1B01G453300 | EnsemblPlants:TraesCS1B01G453300.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1B:-:669728850..669731151
Molecular Weight (calculated)
33016.1 Da
IEP (calculated)
6.625
GRAVY (calculated)
-0.707
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGPAAGGGE DRGGGQLYGD HPPAAADVLV DDVFFQSRSA CGGGDDGGVA PSAYSSITDY LQGLLDPAEL ARHLDAPPCF PAPGDVNVIG EAATPVTPNS
101: STSGEAAGAE SRGCKRGSPV PEEGDEDGSA DQHNHSRSDE KEQKKKGKGE KKARGSRVAF ATKSDVDHLD DGYRWRKYGQ KAVKNSSFPR SYYRCTAARC
201: GVKKLVERSQ QDPSTVVTTY EGRHGHPSPM AAHRGARMLM ATGADTAYSL AALQHHQHDL LPAGADVYGR MCMQPTTAAA PSVAHRLSEY GGMQFHADLL
301: PDDAMGYQHG YR
101: STSGEAAGAE SRGCKRGSPV PEEGDEDGSA DQHNHSRSDE KEQKKKGKGE KKARGSRVAF ATKSDVDHLD DGYRWRKYGQ KAVKNSSFPR SYYRCTAARC
201: GVKKLVERSQ QDPSTVVTTY EGRHGHPSPM AAHRGARMLM ATGADTAYSL AALQHHQHDL LPAGADVYGR MCMQPTTAAA PSVAHRLSEY GGMQFHADLL
301: PDDAMGYQHG YR
001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Arabidopsis Description
WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.