Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012614.1-P | Field mustard | nucleus | 99.68 | 100.0 |
| CDY09083 | Canola | nucleus | 99.68 | 99.68 |
| CDY01523 | Canola | nucleus | 97.12 | 97.44 |
| CDX76541 | Canola | nucleus | 81.79 | 87.07 |
| CDY08894 | Canola | nucleus | 81.15 | 86.39 |
| CDX78832 | Canola | nucleus | 83.39 | 84.74 |
| AT4G18170.1 | Thale cress | nucleus | 85.94 | 84.59 |
| CDX99495 | Canola | nucleus | 82.75 | 83.01 |
| CDY03224 | Canola | nucleus | 59.11 | 57.63 |
| CDY35159 | Canola | nucleus | 58.79 | 57.32 |
| CDY33471 | Canola | nucleus | 58.79 | 56.97 |
| CDX77655 | Canola | nucleus | 58.79 | 56.97 |
| CDY43969 | Canola | nucleus | 56.55 | 55.84 |
| CDY72079 | Canola | nucleus | 19.49 | 54.95 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 46.33 | 45.45 |
| KRH58435 | Soybean | nucleus | 49.2 | 43.02 |
| CDY26310 | Canola | nucleus | 37.38 | 42.86 |
| CDX99859 | Canola | nucleus | 37.06 | 42.49 |
| CDY43194 | Canola | nucleus | 37.38 | 42.24 |
| KRH42308 | Soybean | nucleus | 49.52 | 41.78 |
| CDX98155 | Canola | nucleus | 37.7 | 41.55 |
| CDX87722 | Canola | nucleus | 41.21 | 41.21 |
| CDX77096 | Canola | nucleus | 18.53 | 40.28 |
| CDX70492 | Canola | nucleus | 17.57 | 37.41 |
| CDX78504 | Canola | nucleus | 17.57 | 37.41 |
| CDX69672 | Canola | nucleus | 17.25 | 36.73 |
| CDX97223 | Canola | nucleus | 17.25 | 36.73 |
| CDX83415 | Canola | nucleus, plastid | 21.73 | 36.17 |
| CDX95615 | Canola | nucleus, plastid | 21.73 | 35.79 |
| OQU78504 | Sorghum | nucleus | 29.39 | 35.11 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 33.55 | 35.0 |
| CDX87064 | Canola | nucleus | 18.53 | 33.92 |
| CDY48151 | Canola | nucleus | 18.53 | 33.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.99 | 33.68 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 31.63 | 33.56 |
| CDY24990 | Canola | nucleus | 17.89 | 33.14 |
| CDY05537 | Canola | nucleus | 17.57 | 32.74 |
| CDY30483 | Canola | nucleus | 22.36 | 31.82 |
| CDY71963 | Canola | nucleus | 21.73 | 31.78 |
| CDY23453 | Canola | nucleus | 22.04 | 31.65 |
| CDY37794 | Canola | nucleus | 31.63 | 31.63 |
| CDY48258 | Canola | nucleus | 21.73 | 31.63 |
| CDX80094 | Canola | nucleus | 31.63 | 31.33 |
| CDY44466 | Canola | nucleus | 17.57 | 31.25 |
| CDX88219 | Canola | nucleus | 17.57 | 31.25 |
| CDY52627 | Canola | nucleus | 17.57 | 31.25 |
| CDY39732 | Canola | nucleus | 17.25 | 30.68 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 27.48 | 30.07 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 28.43 | 30.07 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 27.48 | 29.97 |
| CDY51420 | Canola | nucleus | 30.67 | 29.63 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 27.16 | 29.51 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 19.49 | 29.33 |
| CDX95947 | Canola | nucleus | 27.48 | 29.25 |
| CDY40910 | Canola | nucleus | 27.48 | 29.25 |
| CDY54139 | Canola | nucleus | 27.8 | 29.19 |
| Os05t0583000-01 | Rice | nucleus | 31.31 | 29.08 |
| CDY27500 | Canola | nucleus | 30.67 | 28.83 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 28.43 | 28.8 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 28.11 | 28.66 |
| CDY38208 | Canola | nucleus | 16.93 | 28.49 |
| CDY72613 | Canola | nucleus | 29.39 | 28.48 |
| CDY18694 | Canola | nucleus | 15.65 | 28.32 |
| CDY04276 | Canola | nucleus | 25.88 | 28.22 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 28.11 | 28.21 |
| CDY07352 | Canola | nucleus | 25.88 | 28.03 |
| CDY34393 | Canola | nucleus | 16.93 | 27.89 |
| CDY11416 | Canola | nucleus | 26.52 | 27.85 |
| CDY25554 | Canola | nucleus | 16.61 | 27.66 |
| CDY50313 | Canola | nucleus | 27.16 | 27.51 |
| CDY55479 | Canola | nucleus | 16.29 | 27.42 |
| CDX76630 | Canola | nucleus | 25.88 | 27.27 |
| CDX81259 | Canola | nucleus | 16.93 | 26.63 |
| CDY05620 | Canola | nucleus | 33.23 | 26.6 |
| CDY08849 | Canola | nucleus | 17.25 | 26.21 |
| CDY14512 | Canola | nucleus | 17.25 | 26.21 |
| CDY53184 | Canola | nucleus | 24.28 | 25.94 |
| CDX72701 | Canola | nucleus | 23.32 | 25.89 |
| CDY41978 | Canola | nucleus | 24.28 | 25.5 |
| CDY12144 | Canola | nucleus | 23.64 | 25.08 |
| CDX85413 | Canola | nucleus | 31.95 | 25.06 |
| CDY31301 | Canola | nucleus | 15.02 | 23.86 |
| CDY46824 | Canola | nucleus | 14.7 | 15.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DN06 | EnsemblPlants:CDX90417 | ProteinID:CDX90417 | ProteinID:CDX90417.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00151023001 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PIRSF:PIRSF038130 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF56 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc | UniParc:UPI0004EEB54E | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaA03g43640D
Coordinates
chrLK031863:-:57738..59088
Molecular Weight (calculated)
35075.0 Da
IEP (calculated)
6.723
GRAVY (calculated)
-1.024
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNETKDFYN YQFPSSFSLY DMMNLPTSAP SSYGNNGFDL SSYSFTDCLQ SSPGAYDSLL QKNFGLSPSS SEVFNSSIDQ ESKRDVSNDV TGETPTRVSA
101: PSSSSEADHP GEDSGKSQIR KRELAEDGGE ENQNSKKVGK TKKNEEKKQR EPRVSFMTKS EVDHLEDGYR WRKYGQKAVK NSPYPSRSYY RCTTQKCNVK
201: KRVERSFQDP TVVITTYEGQ HNHPIPTNLR GNSAAAAMYS DFMTPRSFTH DMFRTAAYTS GGSVEGALDY GYGQSGYGSV NANPNSSHQN YHQGGEYELL
301: KEILPSIFFK QEH
101: PSSSSEADHP GEDSGKSQIR KRELAEDGGE ENQNSKKVGK TKKNEEKKQR EPRVSFMTKS EVDHLEDGYR WRKYGQKAVK NSPYPSRSYY RCTTQKCNVK
201: KRVERSFQDP TVVITTYEGQ HNHPIPTNLR GNSAAAAMYS DFMTPRSFTH DMFRTAAYTS GGSVEGALDY GYGQSGYGSV NANPNSSHQN YHQGGEYELL
301: KEILPSIFFK QEH
001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
Arabidopsis Description
WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.