Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P06260_001 | Banana | nucleus | 18.33 | 53.4 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 19.67 | 52.68 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 19.67 | 50.43 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 46.33 | 47.12 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 14.67 | 46.81 |
| GSMUA_Achr6P34870_001 | Banana | nucleus | 23.0 | 46.62 |
| GSMUA_Achr9P07230_001 | Banana | mitochondrion | 17.33 | 45.22 |
| GSMUA_Achr7P00580_001 | Banana | cytosol, nucleus, plastid | 21.67 | 43.62 |
| GSMUA_Achr3P31310_001 | Banana | nucleus | 32.67 | 42.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.67 | 40.28 |
| VIT_12s0028g00270.t01 | Wine grape | nucleus | 40.67 | 39.23 |
| GSMUA_Achr9P29350_001 | Banana | nucleus | 20.67 | 38.99 |
| AT1G29860.1 | Thale cress | nucleus | 36.0 | 38.3 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 40.67 | 38.24 |
| GSMUA_Achr6P22160_001 | Banana | nucleus | 44.33 | 37.89 |
| KRH14487 | Soybean | nucleus | 41.67 | 37.31 |
| GSMUA_Achr4P14990_001 | Banana | nucleus | 41.0 | 37.05 |
| GSMUA_Achr7P25400_001 | Banana | nucleus | 40.0 | 36.81 |
| Bra040926.1-P | Field mustard | nucleus | 36.0 | 36.73 |
| CDX98155 | Canola | nucleus | 34.67 | 36.62 |
| Bra030178.1-P | Field mustard | nucleus | 33.67 | 36.46 |
| CDX76541 | Canola | nucleus | 35.67 | 36.39 |
| KRH73639 | Soybean | nucleus | 40.67 | 36.2 |
| CDY43194 | Canola | nucleus | 33.33 | 36.1 |
| GSMUA_Achr9P01400_001 | Banana | nucleus | 21.67 | 35.91 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 21.33 | 35.56 |
| Bra032340.1-P | Field mustard | nucleus | 32.33 | 35.53 |
| CDY26310 | Canola | nucleus | 32.33 | 35.53 |
| Bra013289.1-P | Field mustard | nucleus | 36.33 | 35.39 |
| CDX78832 | Canola | nucleus | 36.33 | 35.39 |
| CDY08894 | Canola | nucleus | 34.67 | 35.37 |
| CDX99859 | Canola | nucleus | 32.0 | 35.16 |
| GSMUA_Achr1P04770_001 | Banana | nucleus | 34.33 | 34.8 |
| KRH58435 | Soybean | nucleus | 41.33 | 34.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.67 | 34.55 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.33 | 34.46 |
| CDX99495 | Canola | nucleus | 35.67 | 34.29 |
| CDY01523 | Canola | nucleus | 35.33 | 33.97 |
| KRH42308 | Soybean | nucleus | 42.0 | 33.96 |
| GSMUA_Achr4P02800_001 | Banana | nucleus | 37.0 | 33.74 |
| GSMUA_Achr6P06360_001 | Banana | nucleus | 20.67 | 33.7 |
| Bra012614.1-P | Field mustard | nucleus | 35.0 | 33.65 |
| AT4G18170.1 | Thale cress | nucleus | 35.67 | 33.65 |
| CDX90417 | Canola | nucleus | 35.0 | 33.55 |
| CDY09083 | Canola | nucleus | 35.0 | 33.55 |
| GSMUA_Achr8P26240_001 | Banana | nucleus | 19.0 | 33.14 |
| GSMUA_Achr7P23980_001 | Banana | mitochondrion | 18.67 | 33.14 |
| GSMUA_Achr4P08880_001 | Banana | nucleus | 18.0 | 32.73 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 28.0 | 32.06 |
| Bra022033.1-P | Field mustard | nucleus | 32.67 | 30.91 |
| CDY43969 | Canola | nucleus | 32.67 | 30.91 |
| CDY03224 | Canola | nucleus | 33.0 | 30.84 |
| CDY35159 | Canola | nucleus | 32.33 | 30.22 |
| Bra017561.1-P | Field mustard | nucleus | 32.33 | 30.22 |
| AT5G46350.1 | Thale cress | nucleus | 32.67 | 30.06 |
| CDX77655 | Canola | nucleus | 32.33 | 30.03 |
| Bra025021.1-P | Field mustard | nucleus | 32.0 | 29.72 |
| CDY33471 | Canola | nucleus | 31.67 | 29.41 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 19.67 | 29.21 |
| GSMUA_Achr8P10740_001 | Banana | nucleus | 30.0 | 28.75 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 21.33 | 28.19 |
| GSMUA_Achr7P13310_001 | Banana | nucleus | 21.33 | 26.89 |
| CDX87722 | Canola | nucleus | 27.67 | 26.52 |
| GSMUA_Achr4P07920_001 | Banana | nucleus | 41.33 | 25.46 |
| GSMUA_Achr10P... | Banana | nucleus | 22.0 | 24.0 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr6G27090_001 | EnsemblPlants:GSMUA_Achr6P27090_001 | EnsemblPlants:GSMUA_Achr6T27090_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0TAK4 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF56 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002951F09 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
DNA-binding WRKY domain-containing protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G27090_001]
Coordinates
chr6:+:27684623..27686302
Molecular Weight (calculated)
33746.8 Da
IEP (calculated)
6.758
GRAVY (calculated)
-1.073
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGERTEPYL HGHYDDLFSI FSQKPGGGRA DGLQGFDHQM ASHVLSPSDR LHGSPMDYLL LARGFDFSSS QPDDLVVGSR RSKTAPAGGS DGKTLVTPNF
101: STSSSSTELV GEEDSGPRKT DQRKQEEEEE EKQAEGGEEG PDEFKKANNP RRKKGEKRER EPRFAFMTRS EVDHLEDGYR WRKYGQKAVK NSAYPRSYYR
201: CTAQSCDVKK RVERSHQDPT VVITTYEGHH THHSPVNVWG STYSSSPSPA MPMDLRHDLL LQQAFPAGYT NPNMHLPRPP TPDYGLLQDI VTSFDHSSQR
101: STSSSSTELV GEEDSGPRKT DQRKQEEEEE EKQAEGGEEG PDEFKKANNP RRKKGEKRER EPRFAFMTRS EVDHLEDGYR WRKYGQKAVK NSAYPRSYYR
201: CTAQSCDVKK RVERSHQDPT VVITTYEGHH THHSPVNVWG STYSSSPSPA MPMDLRHDLL LQQAFPAGYT NPNMHLPRPP TPDYGLLQDI VTSFDHSSQR
001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
Arabidopsis Description
WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.