Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0069g00980.t01 | Wine grape | nucleus | 31.98 | 54.46 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 29.65 | 54.26 |
| PGSC0003DMT400083306 | Potato | nucleus | 29.65 | 50.0 |
| GSMUA_Achr4P08880_001 | Banana | nucleus | 40.7 | 42.42 |
| GSMUA_Achr5P06260_001 | Banana | nucleus | 24.42 | 40.78 |
| PGSC0003DMT400080128 | Potato | extracellular | 31.98 | 39.86 |
| GSMUA_Achr9P07230_001 | Banana | mitochondrion | 25.58 | 38.26 |
| VIT_04s0069g00970.t01 | Wine grape | nucleus | 34.3 | 37.82 |
| VIT_07s0031g01710.t01 | Wine grape | nucleus | 38.95 | 37.22 |
| Solyc04g051690.2.1 | Tomato | nucleus | 37.21 | 36.78 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 23.84 | 36.61 |
| KRH43323 | Soybean | nucleus | 38.95 | 36.41 |
| GSMUA_Achr7P23980_001 | Banana | mitochondrion | 35.47 | 36.09 |
| KRH59457 | Soybean | nucleus | 38.95 | 35.64 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 23.84 | 35.04 |
| Bra037796.1-P | Field mustard | nucleus | 33.14 | 33.93 |
| CDY18694 | Canola | nucleus | 33.72 | 33.53 |
| KRH53804 | Soybean | nucleus | 37.79 | 33.16 |
| KRH64140 | Soybean | nucleus | 37.21 | 32.65 |
| CDX81259 | Canola | nucleus | 36.05 | 31.16 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 35.47 | 30.2 |
| GSMUA_Achr6P34870_001 | Banana | nucleus | 25.58 | 29.73 |
| GSMUA_Achr9P29350_001 | Banana | nucleus | 27.33 | 29.56 |
| AT5G64810.1 | Thale cress | nucleus | 33.14 | 29.38 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 30.23 | 28.89 |
| GSMUA_Achr7P00580_001 | Banana | cytosol, nucleus, plastid | 25.0 | 28.86 |
| CDY31301 | Canola | nucleus | 31.98 | 27.92 |
| Bra031900.1-P | Field mustard | nucleus | 31.98 | 27.92 |
| Bra024328.1-P | Field mustard | nucleus | 33.14 | 27.67 |
| CDY08849 | Canola | nucleus | 32.56 | 27.18 |
| CDY14512 | Canola | nucleus | 32.56 | 27.18 |
| GSMUA_Achr9P01400_001 | Banana | nucleus | 28.49 | 27.07 |
| Solyc12g056750.1.1 | Tomato | nucleus | 29.07 | 26.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.33 | 26.55 |
| PGSC0003DMT400079980 | Potato | nucleus | 34.3 | 25.54 |
| PGSC0003DMT400059673 | Potato | nucleus | 31.4 | 25.35 |
| Solyc04g072070.2.1 | Tomato | nucleus | 33.14 | 25.0 |
| GSMUA_Achr6P06360_001 | Banana | nucleus | 26.16 | 24.46 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 30.23 | 22.91 |
| GSMUA_Achr3P31310_001 | Banana | nucleus | 27.33 | 20.52 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 30.81 | 20.23 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 33.14 | 19.0 |
| CDY46824 | Canola | nucleus | 31.98 | 18.97 |
| GSMUA_Achr8P10740_001 | Banana | nucleus | 33.14 | 18.21 |
| GSMUA_Achr7P13310_001 | Banana | nucleus | 25.0 | 18.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.23 | 18.06 |
| GSMUA_Achr1P04770_001 | Banana | nucleus | 30.81 | 17.91 |
| GSMUA_Achr7P25400_001 | Banana | nucleus | 32.56 | 17.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.65 | 16.94 |
| GSMUA_Achr4P14990_001 | Banana | nucleus | 31.98 | 16.57 |
| GSMUA_Achr6P22160_001 | Banana | nucleus | 32.56 | 15.95 |
| GSMUA_Achr10P... | Banana | nucleus | 25.0 | 15.64 |
| GSMUA_Achr4P02800_001 | Banana | nucleus | 29.65 | 15.5 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 26.16 | 15.25 |
| GSMUA_Achr4P07920_001 | Banana | nucleus | 32.56 | 11.5 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr8G26240_001 | EnsemblPlants:GSMUA_Achr8P26240_001 | EnsemblPlants:GSMUA_Achr8T26240_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0TTS7 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF79 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002960A46 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G26240_001]
Coordinates
chr8:-:29852663..29853864
Molecular Weight (calculated)
19311.2 Da
IEP (calculated)
8.221
GRAVY (calculated)
-0.994
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSNSSENAL PEDGVFEVDD YLTFADDGHE EASLSHPSVH RYPLVQAADC AANKTKITDC NKQVSKDAGK RSSKRSSSFK VAFKTKSELE ILDDGYKWRK
101: YGKKAVKSSP NPRNYYRCSS EGCQVKKKVE RHRDDSSFVI TTYEGTHNHH APYPAVTQHR AVETPNSHDL SC
101: YGKKAVKSSP NPRNYYRCSS EGCQVKKKVE RHRDDSSFVI TTYEGTHNHH APYPAVTQHR AVETPNSHDL SC
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.