Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g051690.2.1 | Tomato | nucleus | 75.36 | 59.77 |
| VIT_04s0069g00980.t01 | Wine grape | nucleus | 39.86 | 54.46 |
| PGSC0003DMT400083306 | Potato | nucleus | 36.23 | 49.02 |
| VIT_04s0069g00970.t01 | Wine grape | nucleus | 47.1 | 41.67 |
| VIT_07s0031g01710.t01 | Wine grape | nucleus | 51.45 | 39.44 |
| GSMUA_Achr7P23980_001 | Banana | mitochondrion | 43.48 | 35.5 |
| KRH43323 | Soybean | nucleus | 47.1 | 35.33 |
| Bra037796.1-P | Field mustard | nucleus | 42.75 | 35.12 |
| CDY18694 | Canola | nucleus | 43.48 | 34.68 |
| GSMUA_Achr4P08880_001 | Banana | nucleus | 41.3 | 34.55 |
| KRH59457 | Soybean | nucleus | 46.38 | 34.04 |
| KRH64140 | Soybean | nucleus | 45.65 | 32.14 |
| GSMUA_Achr8P26240_001 | Banana | nucleus | 39.86 | 31.98 |
| CDX81259 | Canola | nucleus | 44.2 | 30.65 |
| KRH53804 | Soybean | nucleus | 43.48 | 30.61 |
| PGSC0003DMT400052057 | Potato | nucleus | 31.16 | 30.5 |
| AT5G64810.1 | Thale cress | nucleus | 42.75 | 30.41 |
| CDY31301 | Canola | nucleus | 42.03 | 29.44 |
| Bra031900.1-P | Field mustard | nucleus | 42.03 | 29.44 |
| Bra024328.1-P | Field mustard | nucleus | 43.48 | 29.13 |
| CDY08849 | Canola | nucleus | 42.75 | 28.64 |
| CDY14512 | Canola | nucleus | 42.75 | 28.64 |
| PGSC0003DMT400056352 | Potato | nucleus | 31.88 | 25.58 |
| PGSC0003DMT400059673 | Potato | nucleus | 39.13 | 25.35 |
| PGSC0003DMT400021144 | Potato | nucleus | 21.74 | 23.44 |
| PGSC0003DMT400079980 | Potato | nucleus | 37.68 | 22.51 |
| PGSC0003DMT400032090 | Potato | nucleus | 34.78 | 21.05 |
| PGSC0003DMT400050745 | Potato | nucleus | 35.51 | 20.94 |
| CDY46824 | Canola | nucleus | 41.3 | 19.66 |
| PGSC0003DMT400069966 | Potato | nucleus | 34.06 | 18.8 |
| PGSC0003DMT400080069 | Potato | nucleus | 33.33 | 18.33 |
| PGSC0003DMT400020102 | Potato | nucleus | 39.13 | 16.17 |
| PGSC0003DMT400044721 | Potato | nucleus | 36.23 | 15.67 |
| PGSC0003DMT400023368 | Potato | nucleus | 34.78 | 15.14 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 35.51 | 15.03 |
| PGSC0003DMT400025113 | Potato | nucleus | 34.06 | 14.78 |
| PGSC0003DMT400029812 | Potato | nucleus | 35.51 | 14.45 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1D315 | PFAM:PF03106 | EnsemblPlantsGene:PGSC0003DMG401031196 |
| PGSC:PGSC0003DMG401031196 | EnsemblPlants:PGSC0003DMT400080128 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF48 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002948D2F | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : |
Description
WRKY transcription factor 16 [Source:PGSC_GENE;Acc:PGSC0003DMG401031196]
Coordinates
chr4:-:54616205..54620206
Molecular Weight (calculated)
16125.6 Da
IEP (calculated)
9.866
GRAVY (calculated)
-0.487
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLFKVFPIV VDHIQIIPLQ QVITCKKCMK GVKKVDAKSR VAFRFRSELE VLDDGFKWRK YGKKMVKNSS NPREIFMNGN YYKCSSGGCN VKKRVERDNE
101: DSSYVITTYE GIHNHESPYV FHYTQFPPNN IALHNLCL
101: DSSYVITTYE GIHNHESPYV FHYTQFPPNN IALHNLCL
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.