Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400083306 | Potato | nucleus | 46.01 | 96.08 |
| Solyc12g056750.1.1 | Tomato | nucleus | 66.2 | 75.0 |
| VIT_04s0069g00980.t01 | Wine grape | nucleus | 22.54 | 47.52 |
| PGSC0003DMT400080128 | Potato | extracellular | 25.35 | 39.13 |
| VIT_07s0031g01710.t01 | Wine grape | nucleus | 32.86 | 38.89 |
| AT5G64810.1 | Thale cress | nucleus | 33.33 | 36.6 |
| Bra024328.1-P | Field mustard | nucleus | 35.21 | 36.41 |
| Bra037796.1-P | Field mustard | nucleus | 28.64 | 36.31 |
| CDX81259 | Canola | nucleus | 33.8 | 36.18 |
| KRH59457 | Soybean | nucleus | 31.92 | 36.17 |
| KRH43323 | Soybean | nucleus | 30.99 | 35.87 |
| CDY18694 | Canola | nucleus | 29.11 | 35.84 |
| CDY08849 | Canola | nucleus | 34.27 | 35.44 |
| CDY14512 | Canola | nucleus | 34.27 | 35.44 |
| VIT_04s0069g00970.t01 | Wine grape | nucleus | 25.35 | 34.62 |
| CDY31301 | Canola | nucleus | 31.46 | 34.01 |
| Bra031900.1-P | Field mustard | nucleus | 31.46 | 34.01 |
| KRH53804 | Soybean | nucleus | 30.05 | 32.65 |
| KRH64140 | Soybean | nucleus | 30.05 | 32.65 |
| GSMUA_Achr8P26240_001 | Banana | nucleus | 25.35 | 31.4 |
| GSMUA_Achr7P23980_001 | Banana | mitochondrion | 24.88 | 31.36 |
| GSMUA_Achr4P08880_001 | Banana | nucleus | 23.94 | 30.91 |
| PGSC0003DMT400079980 | Potato | nucleus | 33.33 | 30.74 |
| PGSC0003DMT400052057 | Potato | nucleus | 19.72 | 29.79 |
| PGSC0003DMT400021144 | Potato | nucleus | 15.02 | 25.0 |
| PGSC0003DMT400056352 | Potato | nucleus | 20.19 | 25.0 |
| CDY46824 | Canola | nucleus | 33.33 | 24.48 |
| PGSC0003DMT400069966 | Potato | nucleus | 24.41 | 20.8 |
| PGSC0003DMT400050745 | Potato | nucleus | 22.07 | 20.09 |
| PGSC0003DMT400032090 | Potato | nucleus | 20.66 | 19.3 |
| PGSC0003DMT400080069 | Potato | nucleus | 22.54 | 19.12 |
| PGSC0003DMT400044721 | Potato | nucleus | 25.82 | 17.24 |
| PGSC0003DMT400020102 | Potato | nucleus | 26.76 | 17.07 |
| PGSC0003DMT400023368 | Potato | nucleus | 25.35 | 17.03 |
| PGSC0003DMT400025113 | Potato | nucleus | 24.88 | 16.67 |
| PGSC0003DMT400029812 | Potato | nucleus | 23.47 | 14.75 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 22.07 | 14.42 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1C4K4 | PFAM:PF03106 | EnsemblPlantsGene:PGSC0003DMG400023196 |
| PGSC:PGSC0003DMG400023196 | EnsemblPlants:PGSC0003DMT400059673 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF83 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002952567 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
WRKY transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400023196]
Coordinates
chr12:-:54862748..54865362
Molecular Weight (calculated)
24899.9 Da
IEP (calculated)
8.419
GRAVY (calculated)
-0.946
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNQNFSYNY QDNFLDQDFE FSSFLDHLLV DYVPTYNNSN NTPLSEINPS MHEISSSSAN SASSTTSFYA TPPNINHLKE KSKVGIIKKE MIKKNERHVI
101: AFSTKTQLEI LDDGYKWRKY GKKKVKSNTN YLRNYYKCSI RGCEVKKRVE RDGHDSSYLI TTYEGKHNHE INSSIIYNHV EADSEFELNF HRRGGKRVER
201: DHGHDSSCVH YYI
101: AFSTKTQLEI LDDGYKWRKY GKKKVKSNTN YLRNYYKCSI RGCEVKKRVE RDGHDSSYLI TTYEGKHNHE INSSIIYNHV EADSEFELNF HRRGGKRVER
201: DHGHDSSCVH YYI
001: MNISQNPSPN FTYFSDENFI NPFMDNNDFS NLMFFDIDEG GNNGLIEEEI SSPTSIVSSE TFTGESGGSG SATTLSKKES TNRGSKESDQ TKETGHRVAF
101: RTRSKIDVMD DGFKWRKYGK KSVKNNINKR NYYKCSSEGC SVKKRVERDG DDAAYVITTY EGVHNHESLS NVYYNEMVLS YDHDNWNQHS LLRS
101: RTRSKIDVMD DGFKWRKYGK KSVKNNINKR NYYKCSSEGC SVKKRVERDG DDAAYVITTY EGVHNHESLS NVYYNEMVLS YDHDNWNQHS LLRS
Arabidopsis Description
WRKY51Probable WRKY transcription factor 51 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.