Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g079260.2.1 | Tomato | nucleus | 86.75 | 85.94 |
| PGSC0003DMT400052057 | Potato | nucleus | 19.56 | 43.97 |
| KRH68280 | Soybean | nucleus | 38.8 | 42.86 |
| KRG96545 | Soybean | nucleus | 39.12 | 42.76 |
| PGSC0003DMT400083306 | Potato | nucleus | 12.93 | 40.2 |
| VIT_07s0005g01710.t01 | Wine grape | nucleus | 38.17 | 40.07 |
| PGSC0003DMT400069966 | Potato | nucleus | 30.91 | 39.2 |
| KRH69197 | Soybean | nucleus | 39.12 | 38.75 |
| KRH31775 | Soybean | nucleus | 39.12 | 38.39 |
| PGSC0003DMT400056352 | Potato | nucleus | 19.87 | 36.63 |
| CDY37794 | Canola | nucleus | 35.96 | 36.42 |
| CDX80094 | Canola | nucleus | 36.28 | 36.39 |
| Bra004466.1-P | Field mustard | nucleus | 36.59 | 36.36 |
| AT2G47260.1 | Thale cress | nucleus | 37.54 | 35.31 |
| PGSC0003DMT400080128 | Potato | extracellular | 15.14 | 34.78 |
| AT3G62340.1 | Thale cress | nucleus | 29.97 | 34.3 |
| PGSC0003DMT400044721 | Potato | nucleus | 33.75 | 33.54 |
| Bra021393.1-P | Field mustard | nucleus | 32.49 | 31.89 |
| CDY51420 | Canola | nucleus | 32.49 | 31.79 |
| CDY27500 | Canola | nucleus | 33.12 | 31.53 |
| CDX76630 | Canola | nucleus | 29.02 | 30.98 |
| Bra007674.1-P | Field mustard | nucleus | 29.02 | 30.87 |
| CDY11416 | Canola | nucleus | 29.02 | 30.87 |
| PGSC0003DMT400025113 | Potato | nucleus | 30.28 | 30.19 |
| PGSC0003DMT400050745 | Potato | nucleus | 22.08 | 29.91 |
| PGSC0003DMT400020102 | Potato | nucleus | 31.23 | 29.64 |
| PGSC0003DMT400029812 | Potato | nucleus | 30.6 | 28.61 |
| PGSC0003DMT400032090 | Potato | nucleus | 19.87 | 27.63 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 27.76 | 26.99 |
| PGSC0003DMT400080069 | Potato | nucleus | 20.5 | 25.9 |
| PGSC0003DMT400059673 | Potato | nucleus | 17.03 | 25.35 |
| PGSC0003DMT400021144 | Potato | nucleus | 9.15 | 22.66 |
| PGSC0003DMT400079980 | Potato | nucleus | 16.4 | 22.51 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ProteinID:ABU49723 | ProteinID:ABU49723.1 | ncoils:Coil | EMBL:EU056916 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | UniProt:M1AI80 | PFAM:PF03106 | EnsemblPlantsGene:PGSC0003DMG400009051 | PGSC:PGSC0003DMG400009051 | EnsemblPlants:PGSC0003DMT400023368 |
| PIRSF:PIRSF038130 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF83 | SMART:SM00774 | SUPFAM:SSF118290 |
| InterPro:TF_WRKY_IIc | UniParc:UPI0002953FB2 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
WRKY transcription factor 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400009051]
Coordinates
chr1:-:62914548..62917002
Molecular Weight (calculated)
35881.0 Da
IEP (calculated)
6.505
GRAVY (calculated)
-0.715
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYKDIKME DHHPMYFIDN NNFGVTNHSL ISDYNINTSS LGFMELLGFH QDFYSSASAF ELPKEENYCP AVCVSEEEEV KPSSVVPENQ IISSTTVATG
101: NVLNTPSTPN CSSISSEGHG DADGEVENHE QQNTKTKQQL KAKKTVSQKK QKEPRFAFMT KSEVDFLEDG YRWRKYGQKA VKNSPFPRNY YRCTNATCNV
201: KKRVERCFSD PSIVVTTYEG KHTHPSPMNM MMSRPNCYPI NPLLPSPGTF TLPMQFNINQ SFNNLTSSNL AMNNQLDHAA FAAQGRRFCS NTEMLGDQGI
301: DLQDLMPSAV LKHEYNR
101: NVLNTPSTPN CSSISSEGHG DADGEVENHE QQNTKTKQQL KAKKTVSQKK QKEPRFAFMT KSEVDFLEDG YRWRKYGQKA VKNSPFPRNY YRCTNATCNV
201: KKRVERCFSD PSIVVTTYEG KHTHPSPMNM MMSRPNCYPI NPLLPSPGTF TLPMQFNINQ SFNNLTSSNL AMNNQLDHAA FAAQGRRFCS NTEMLGDQGI
301: DLQDLMPSAV LKHEYNR
001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Arabidopsis Description
WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.