Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g089960.2.1 | Tomato | nucleus | 88.05 | 93.64 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 38.25 | 85.71 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 37.45 | 80.34 |
| KRH66475 | Soybean | nucleus | 63.35 | 66.81 |
| KRH48843 | Soybean | nucleus | 62.55 | 66.24 |
| KRH40189 | Soybean | nucleus | 57.37 | 60.5 |
| CDX83415 | Canola | nucleus, plastid | 44.22 | 59.04 |
| CDX95615 | Canola | nucleus, plastid | 44.62 | 58.95 |
| AT2G44745.1 | Thale cress | nucleus | 49.8 | 57.34 |
| CDY30483 | Canola | nucleus | 49.4 | 56.36 |
| Bra000362.1-P | Field mustard | nucleus | 46.61 | 55.71 |
| CDY23453 | Canola | nucleus | 48.21 | 55.5 |
| Bra004864.1-P | Field mustard | nucleus | 47.01 | 54.88 |
| CDY71963 | Canola | nucleus | 46.61 | 54.67 |
| CDY48258 | Canola | nucleus | 46.61 | 54.42 |
| TraesCS2B01G410400.1 | Wheat | nucleus | 45.02 | 49.34 |
| TraesCS2D01G390200.1 | Wheat | nucleus | 44.62 | 48.91 |
| TraesCS2A01G392100.1 | Wheat | nucleus | 44.22 | 48.47 |
| Zm00001d017444_P001 | Maize | extracellular, vacuole | 44.22 | 48.05 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 43.82 | 47.83 |
| Zm00001d051328_P002 | Maize | nucleus | 43.43 | 46.38 |
| KXG31104 | Sorghum | nucleus | 43.82 | 46.22 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 41.43 | 45.81 |
| TraesCS6D01G223900.1 | Wheat | cytosol | 43.03 | 45.76 |
| TraesCS6B01G282500.1 | Wheat | nucleus | 43.03 | 45.76 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 42.63 | 45.34 |
| Os04t0545000-01 | Rice | cytosol | 45.02 | 45.2 |
| KXG26824 | Sorghum | nucleus | 43.03 | 40.15 |
| PGSC0003DMT400083306 | Potato | nucleus | 15.94 | 39.22 |
| PGSC0003DMT400050745 | Potato | nucleus | 35.86 | 38.46 |
| PGSC0003DMT400052057 | Potato | nucleus | 21.51 | 38.3 |
| Zm00001d002794_P001 | Maize | nucleus | 42.23 | 37.32 |
| PGSC0003DMT400056352 | Potato | nucleus | 24.3 | 35.47 |
| PGSC0003DMT400080128 | Potato | extracellular | 18.33 | 33.33 |
| PGSC0003DMT400032090 | Potato | nucleus | 24.3 | 26.75 |
| PGSC0003DMT400069966 | Potato | nucleus | 24.3 | 24.4 |
| PGSC0003DMT400059673 | Potato | nucleus | 19.12 | 22.54 |
| PGSC0003DMT400025113 | Potato | nucleus | 28.29 | 22.33 |
| PGSC0003DMT400044721 | Potato | nucleus | 28.29 | 22.26 |
| PGSC0003DMT400021144 | Potato | nucleus | 10.76 | 21.09 |
| PGSC0003DMT400020102 | Potato | nucleus | 27.89 | 20.96 |
| PGSC0003DMT400023368 | Potato | nucleus | 25.9 | 20.5 |
| PGSC0003DMT400029812 | Potato | nucleus | 27.09 | 20.06 |
| PGSC0003DMT400079980 | Potato | nucleus | 18.33 | 19.91 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 24.7 | 19.02 |
Protein Annotations
| EntrezGene:102578532 | MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1D2Y0 | PFAM:PF03106 |
| EnsemblPlantsGene:PGSC0003DMG400031175 | PGSC:PGSC0003DMG400031175 | EnsemblPlants:PGSC0003DMT400080069 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF17 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0002953B30 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | RefSeq:XP_006347986.1 |
| SEG:seg | : | : | : | : | : |
Description
Transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400031175]
Coordinates
chr1:-:69021571..69027216
Molecular Weight (calculated)
27503.4 Da
IEP (calculated)
8.084
GRAVY (calculated)
-0.780
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MERGSEERNQ LNNYNLQVSF SSSSSAAAPN HVHHELGFIH FADQNLSFLA PSSQSSQSLQ AAAAAAAAAA SVSVTPSAAI NTNAAAAGAS NNVGGGGGGL
101: GFSHNELLVN RPSWNNNEQV ETLDPKGIND ENCSGNASEG NNSWWKSSSS DKGKVKIRRK LREPRFCFQT RSDIDVLDDG YKWRKYGQKV VKNSLHPRSY
201: YRCTHSNCRV KKRVERLSED CRMVITTYEG RHNHSPCDDS NSSDHDCFTS F
101: GFSHNELLVN RPSWNNNEQV ETLDPKGIND ENCSGNASEG NNSWWKSSSS DKGKVKIRRK LREPRFCFQT RSDIDVLDDG YKWRKYGQKV VKNSLHPRSY
201: YRCTHSNCRV KKRVERLSED CRMVITTYEG RHNHSPCDDS NSSDHDCFTS F
001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
Arabidopsis Description
WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.