Factsheet for Os04t0545000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P06860_001	Banana	nucleus	36.8	78.63
CDX83415	Canola	nucleus, plastid	37.2	49.47
CDX95615	Canola	nucleus, plastid	37.2	48.95
KRH66475	Soybean	nucleus	44.8	47.06
Solyc01g089960.2.1	Tomato	nucleus	44.4	47.03
KRH48843	Soybean	nucleus	44.0	46.41
AT2G44745.1	Thale cress	nucleus	40.4	46.33
Bra000362.1-P	Field mustard	nucleus	38.8	46.19
CDY23453	Canola	nucleus	40.0	45.87
KRH40189	Soybean	nucleus	43.6	45.8
CDY30483	Canola	nucleus	40.0	45.45
Os02t0652100-01	Rice	extracellular, mitochondrion, nucleus	29.6	45.4
CDY71963	Canola	nucleus	38.8	45.33
CDY48258	Canola	nucleus	38.8	45.12
Bra004864.1-P	Field mustard	nucleus	38.8	45.12
PGSC0003DMT400080069	Potato	nucleus	45.2	45.02
Os01t0182700-01	Rice	nucleus	34.8	31.07
Os01t0734000-01	Rice	nucleus	27.6	27.17
Os11t0490900-01	Rice	nucleus	26.0	26.86
Os01t0186000-01	Rice	cytosol, nucleus	19.6	25.39
Os05t0537100-00	Rice	cytosol, plastid	22.4	25.34
Os05t0183100-01	Rice	nucleus	20.8	24.53
Os03t0758000-01	Rice	nucleus, plastid	22.0	23.81
Os01t0714800-01	Rice	plastid	22.4	22.86
Os01t0584900-01	Rice	nucleus	22.4	22.76
Os07t0111400-00	Rice	nucleus	24.0	20.69
Os05t0583000-01	Rice	nucleus	25.6	18.99
Os05t0565900-00	Rice	nucleus	29.2	17.42
Os01t0626400-01	Rice	nucleus	25.2	16.62
Os01t0665500-00	Rice	plastid	1.2	2.63

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4336561	EMBL:AK073695	ProteinID:BAF15378.1	ProteinID:BAS90328.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EMBL:HQ858855
InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os04g0545000	EnsemblPlants:Os04t0545000-01	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF17	UniProt:Q0JBA9	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0000DD91D9
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_015635033.1	SEG:seg	:	:

Description

WRKY GENE 36Similar to WRKY transcription factor 34. (Os04t0545000-01)

Coordinates

chr4:-:27284275..27290982

Molecular Weight (calculated)

27199.1 Da

IEP (calculated)

7.809

GRAVY (calculated)

-0.426

Length

250 amino acids

Sequence
(BLAST)

001: MYACMEGSQL ETACLPAALY APLCPYTPPS PPSFLAPLPS LQHKLPQLPQ LVHDHAAATG TNHGVMFSSD HGCLYPLLPG IPFCLDSGCG AAACDDDKPA
101: GFAHLGSAEA DTSAAAARVD SEIAAAATAT TCHGPNSWWK GTEKGKMKVR RKMREPRFCF QTRSDVDVLD DGYKWRKYGQ KVVKNSLHPR SYYRCTHNNC
201: RVKKRVERLS EDCRMVITTY EGRHTHTPCS DDATTGAAGD HTASCAFTSF

Best Arabidopsis Sequence Match ( AT2G44745.1 )
(BLAST)

001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF

Arabidopsis Description

WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.