Factsheet for Os05t0565900-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G088300.1	Barley	nucleus	42.0	61.11
EES18690	Sorghum	nucleus	59.67	58.96
TraesCS1A01G401800.1	Wheat	nucleus	53.22	56.03
Zm00001d039032_P001	Maize	nucleus	53.7	55.15
GSMUA_Achr3P31310_001	Banana	nucleus	24.82	45.41
Os03t0758000-01	Rice	nucleus, plastid	21.72	39.39
GSMUA_Achr6P22160_001	Banana	nucleus	32.22	38.46
GSMUA_Achr1P04770_001	Banana	nucleus	26.49	37.5
Os01t0626400-01	Rice	nucleus	33.89	37.47
GSMUA_Achr7P25400_001	Banana	nucleus	28.64	36.81
Os07t0111400-00	Rice	nucleus	25.06	36.21
Os05t0583000-01	Rice	nucleus	28.88	35.91
Solyc02g071130.2.1	Tomato	nucleus	26.97	35.65
PGSC0003DMT400025113	Potato	nucleus	26.97	35.53
GSMUA_Achr4P14990_001	Banana	nucleus	27.45	34.64
GSMUA_Achr4P02800_001	Banana	nucleus	26.25	33.43
Os11t0490900-01	Rice	nucleus	18.62	32.23
Os01t0665500-00	Rice	plastid	8.35	30.7
Os04t0545000-01	Rice	cytosol	17.42	29.2
Os01t0186000-01	Rice	cytosol, nucleus	12.41	26.94
Os05t0183100-01	Rice	nucleus	13.13	25.94
Os02t0652100-01	Rice	extracellular, mitochondrion, nucleus	10.02	25.77
Os05t0537100-00	Rice	cytosol, plastid	13.37	25.34
GSMUA_Achr4P07920_001	Banana	nucleus	29.36	25.26
Os01t0584900-01	Rice	nucleus	14.56	24.8
Os01t0734000-01	Rice	nucleus	14.8	24.41
Os01t0714800-01	Rice	plastid	14.08	24.08
Os01t0182700-01	Rice	nucleus	14.56	21.79

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:9268095	ProteinID:AAU10654.1	ProteinID:BAS95369.1	ProteinID:EEE64712.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016151	GO:GO:0016787	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
EnsemblPlantsGene:Os05g0565900	EnsemblPlants:Os05t0565900-00	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF83
UniProt:Q688X5	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000042ABA3	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_015637917.1	SEG:seg	:	:	:	:

Description

WRKY GENE 49DNA-binding WRKY domain containing protein. (Os05t0565900-00)

Coordinates

chr5:+:28154693..28157931

Molecular Weight (calculated)

43956.3 Da

IEP (calculated)

6.678

GRAVY (calculated)

-0.606

Length

419 amino acids

Sequence
(BLAST)

001: MSGGGGGGEG FPFHDELASL FAERPPNGAM PGMLQQQQPW SFIDYHHHLM QESAPTTPPL DYEAFAGEFD DDVAPLEEVK RELVVDGVGL FPGGGASAAA
101: AAAAVAGPMT PNSMSVSSTS SEACGVGGGA GGDEESAGKC KKEEEGDGGD DDGKEGSSTT KGDGDGEDKN KKGGKGKGKG EKRPRQPRFA FMTKSEVDHL
201: EDGYRWRKYG QKAVKNSPFP RSYYRCTTQK CPVKKRVERS YQDAAVVITT YEGKHTHPIP ATLRGTAHLL GAAAAAHHHG GLQYHHPGHF AAAVGHRLPP
301: QPHDALGGGL LAPPHAQHLH AMQHQMQLAA AAAASGGSLH AAAMQQMPQP DHAGLVAIIA STTGASTTPP PPPATGSAAA ATTPLRMQHF MAQDYGLLQD
401: MFIPSPFLHN DDANNNNHR

Best Arabidopsis Sequence Match ( AT4G18170.1 )
(BLAST)

001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP

Arabidopsis Description

WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.