Factsheet for TraesCS2B01G410400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G390200.1	Wheat	nucleus	96.07	96.07
TraesCS2A01G392100.1	Wheat	nucleus	94.32	94.32
HORVU2Hr1G093350.3	Barley	nucleus	93.89	93.48
GSMUA_Achr4P17890_001	Banana	nucleus	39.74	81.25
KXG26824	Sorghum	nucleus	76.86	65.43
Zm00001d002794_P001	Maize	nucleus	75.55	60.92
TraesCS6B01G282500.1	Wheat	nucleus	53.71	52.12
CDX83415	Canola	nucleus, plastid	39.74	48.4
CDX95615	Canola	nucleus, plastid	39.74	47.89
Solyc01g089960.2.1	Tomato	nucleus	48.47	47.03
AT2G44745.1	Thale cress	nucleus	44.54	46.79
KRH66475	Soybean	nucleus	48.47	46.64
CDY71963	Canola	nucleus	43.23	46.26
CDY48258	Canola	nucleus	43.23	46.05
Bra004864.1-P	Field mustard	nucleus	43.23	46.05
KRH48843	Soybean	nucleus	47.6	45.99
CDY23453	Canola	nucleus	43.67	45.87
Bra000362.1-P	Field mustard	nucleus	41.92	45.71
CDY30483	Canola	nucleus	43.67	45.45
PGSC0003DMT400080069	Potato	nucleus	49.34	45.02
KRH40189	Soybean	nucleus	45.41	43.7
TraesCS3B01G135300.1	Wheat	nucleus, plastid	38.43	33.21
TraesCS2B01G010500.1	Wheat	nucleus	29.26	32.68
TraesCS1B01G363200.1	Wheat	nucleus	27.95	27.95
TraesCS1B01G374700.1	Wheat	nucleus, plastid	24.89	25.56
TraesCS1B01G374900.1	Wheat	plastid	24.45	25.45
TraesCS3B01G277300.1	Wheat	plastid	21.83	25.0
TraesCS3B01G240200.1	Wheat	nucleus	22.71	21.76
TraesCS3B01G129900.1	Wheat	nucleus	20.96	21.62
TraesCS1B01G453200.1	Wheat	nucleus	27.07	21.6
TraesCS2B01G280300.1	Wheat	nucleus	26.64	21.4
TraesCS1B01G453300.1	Wheat	nucleus	27.95	20.51
TraesCS5B01G399900.1	Wheat	nucleus	27.51	20.26
TraesCS3B01G256000.1	Wheat	nucleus	27.95	18.5
TraesCS3B01G270500.1	Wheat	nucleus	29.26	18.21

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF17	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS2B01G410400	EnsemblPlants:TraesCS2B01G410400.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:-:583787973..583791861

Molecular Weight (calculated)

25064.7 Da

IEP (calculated)

8.558

GRAVY (calculated)

-0.580

Length

229 amino acids

Sequence
(BLAST)

001: MEGGSQLGAC LPSLYALDPY ASPPLLAPSP NQHKLHQLPP VLQEQPGVHG VMFSSDHGGG LYPLLPGIPF CHSAAACEKH TGFAPLGSTG EAGTLAARQG
101: NEIASATTTT TASCHGPSSW WKGAEKGKMK VRRKMREPRF CFQTRSEVDV LDDGYKWRKY GQKVVKNSLH PRSYYRCTHS NCRVKKRVER LSEDCRMVIT
201: TYEGRHTHTP CSDDDVGGDH TGSCAFTSF

Best Arabidopsis Sequence Match ( AT2G44745.1 )
(BLAST)

001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF

Arabidopsis Description

WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.