Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11416 | Canola | nucleus | 88.89 | 88.59 |
| Bra007674.1-P | Field mustard | nucleus | 88.55 | 88.25 |
| AT3G62340.1 | Thale cress | nucleus | 60.61 | 64.98 |
| CDY72079 | Canola | nucleus | 17.17 | 45.95 |
| CDX77096 | Canola | nucleus | 18.18 | 37.5 |
| CDX69672 | Canola | nucleus | 17.51 | 35.37 |
| CDX70492 | Canola | nucleus | 17.51 | 35.37 |
| CDX78504 | Canola | nucleus | 17.51 | 35.37 |
| CDX97223 | Canola | nucleus | 17.51 | 35.37 |
| CDY37794 | Canola | nucleus | 35.02 | 33.23 |
| CDX80094 | Canola | nucleus | 34.68 | 32.59 |
| CDY44466 | Canola | nucleus | 18.52 | 31.25 |
| CDY51420 | Canola | nucleus | 34.01 | 31.17 |
| CDY39732 | Canola | nucleus | 18.18 | 30.68 |
| CDX83415 | Canola | nucleus, plastid | 19.19 | 30.32 |
| CDX95615 | Canola | nucleus, plastid | 19.19 | 30.0 |
| CDY05537 | Canola | nucleus | 16.84 | 29.76 |
| CDY27500 | Canola | nucleus | 33.33 | 29.73 |
| CDY24990 | Canola | nucleus | 16.84 | 29.59 |
| CDX87064 | Canola | nucleus | 16.84 | 29.24 |
| CDY48151 | Canola | nucleus | 16.84 | 29.24 |
| PGSC0003DMT400023368 | Potato | nucleus | 30.98 | 29.02 |
| CDX88219 | Canola | nucleus | 16.84 | 28.41 |
| CDY52627 | Canola | nucleus | 16.84 | 28.41 |
| Solyc01g079260.2.1 | Tomato | nucleus | 30.3 | 28.12 |
| CDX76541 | Canola | nucleus | 27.61 | 27.89 |
| CDX98155 | Canola | nucleus | 26.6 | 27.82 |
| CDY43194 | Canola | nucleus | 25.93 | 27.8 |
| CDY25554 | Canola | nucleus | 17.51 | 27.66 |
| CDY71963 | Canola | nucleus | 19.87 | 27.57 |
| CDY48258 | Canola | nucleus | 19.87 | 27.44 |
| CDY34393 | Canola | nucleus | 17.51 | 27.37 |
| CDY30483 | Canola | nucleus | 20.2 | 27.27 |
| CDY08894 | Canola | nucleus | 26.6 | 26.87 |
| CDY23453 | Canola | nucleus | 19.53 | 26.61 |
| CDY18694 | Canola | nucleus | 15.49 | 26.59 |
| CDY40910 | Canola | nucleus | 26.26 | 26.53 |
| CDX95947 | Canola | nucleus | 26.26 | 26.53 |
| CDX99859 | Canola | nucleus | 24.24 | 26.37 |
| CDY26310 | Canola | nucleus | 24.24 | 26.37 |
| CDY38208 | Canola | nucleus | 16.5 | 26.34 |
| CDY55479 | Canola | nucleus | 16.5 | 26.34 |
| CDY01523 | Canola | nucleus | 27.61 | 26.28 |
| CDY54139 | Canola | nucleus | 26.26 | 26.17 |
| CDY04276 | Canola | nucleus | 25.25 | 26.13 |
| CDY07352 | Canola | nucleus | 25.25 | 25.95 |
| CDX90417 | Canola | nucleus | 27.27 | 25.88 |
| CDY09083 | Canola | nucleus | 27.27 | 25.88 |
| CDX99495 | Canola | nucleus | 26.26 | 25.0 |
| CDX78832 | Canola | nucleus | 25.93 | 25.0 |
| CDX81259 | Canola | nucleus | 16.5 | 24.62 |
| CDY35159 | Canola | nucleus | 26.6 | 24.61 |
| CDY03224 | Canola | nucleus | 26.6 | 24.61 |
| CDY43969 | Canola | nucleus | 26.26 | 24.61 |
| CDX87722 | Canola | nucleus | 25.59 | 24.28 |
| CDY14512 | Canola | nucleus | 16.84 | 24.27 |
| CDY08849 | Canola | nucleus | 16.84 | 24.27 |
| CDY72613 | Canola | nucleus | 26.26 | 24.15 |
| CDY31301 | Canola | nucleus | 15.82 | 23.86 |
| CDX77655 | Canola | nucleus | 25.59 | 23.53 |
| CDY50313 | Canola | nucleus | 24.24 | 23.3 |
| CDY05620 | Canola | nucleus | 30.64 | 23.27 |
| CDY33471 | Canola | nucleus | 25.25 | 23.22 |
| CDX85413 | Canola | nucleus | 28.62 | 21.3 |
| CDY12144 | Canola | nucleus | 20.88 | 21.02 |
| CDY53184 | Canola | nucleus | 20.54 | 20.82 |
| CDY41978 | Canola | nucleus | 20.88 | 20.81 |
| CDX72701 | Canola | nucleus | 19.19 | 20.21 |
| CDY46824 | Canola | nucleus | 15.82 | 16.21 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078CID5 | EnsemblPlants:CDX76630 | ProteinID:CDX76630 | ProteinID:CDX76630.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00127094001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF83 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEB127 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g32160D
Coordinates
chrLK031808:-:251382..252468
Molecular Weight (calculated)
34003.4 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.903
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTGAGMAF SNLGQTRVDP SLSDSSWERY PVGFMELLGV HHQDSSRYAL SHIPPMQLTA TPNPSSPISY ALCEAVTGEE NNRYYQEHED DEEEQKHTRN
101: KRFKSTRSSE QTKMKAPRVS FITKSLVNNL DDGYKWRKYG QKPVRNSPFP RSYYRCTISC CNVKKRVERS FTDQSCVITT YIGQHTHPRP LILSRQGSFG
201: SDGPASESYF DVTPTLPSQL HQPFHYNNHH QHQSQGLSLF GTEYLSRQEK ELNHDDEYDD HLIKTSRTQD LLDGAGLVKD NGLLQDVVPA HIINEEY
101: KRFKSTRSSE QTKMKAPRVS FITKSLVNNL DDGYKWRKYG QKPVRNSPFP RSYYRCTISC CNVKKRVERS FTDQSCVITT YIGQHTHPRP LILSRQGSFG
201: SDGPASESYF DVTPTLPSQL HQPFHYNNHH QHQSQGLSLF GTEYLSRQEK ELNHDDEYDD HLIKTSRTQD LLDGAGLVKD NGLLQDVVPA HIINEEY
001: MENVGVGMPF YDLGQTRVYP LLSDFHDLSA ERYPVGFMDL LGVHRHTPTH TPLMHFPTTP NSSSSEAVNG DDEEEEDGEE QQHKTKKRFK FTKMSRKQTK
101: KKVPKVSFIT RSEVLHLDDG YKWRKYGQKP VKDSPFPRNY YRCTTTWCDV KKRVERSFSD PSSVITTYEG QHTHPRPLLI MPKEGSSPSN GSASRAHIGL
201: PTLPPQLLDY NNQQQQAPSS FGTEYINRQE KGINHDDDDD HVVKKSRTRD LLDGAGLVKD HGLLQDVVPS HIIKEEY
101: KKVPKVSFIT RSEVLHLDDG YKWRKYGQKP VKDSPFPRNY YRCTTTWCDV KKRVERSFSD PSSVITTYEG QHTHPRPLLI MPKEGSSPSN GSASRAHIGL
201: PTLPPQLLDY NNQQQQAPSS FGTEYINRQE KGINHDDDDD HVVKKSRTRD LLDGAGLVKD HGLLQDVVPS HIIKEEY
Arabidopsis Description
WRKY68Probable WRKY transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.