Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020628.1-P | Field mustard | nucleus | 96.42 | 96.17 |
| CDX85413 | Canola | nucleus | 82.61 | 80.95 |
| CDY72613 | Canola | nucleus | 66.75 | 80.81 |
| AT5G49520.1 | Thale cress | nucleus | 81.59 | 79.95 |
| CDY72079 | Canola | nucleus | 15.86 | 55.86 |
| VIT_05s0077g00730.t01 | Wine grape | nucleus | 36.32 | 45.95 |
| CDX77096 | Canola | nucleus | 16.62 | 45.14 |
| CDX69672 | Canola | nucleus | 15.86 | 42.18 |
| CDX97223 | Canola | nucleus | 15.86 | 42.18 |
| CDX78504 | Canola | nucleus | 15.86 | 42.18 |
| CDX70492 | Canola | nucleus | 15.6 | 41.5 |
| KRH36956 | Soybean | nucleus | 35.04 | 41.39 |
| KRH11917 | Soybean | nucleus | 35.04 | 38.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.13 | 36.54 |
| CDY54139 | Canola | nucleus | 27.11 | 35.57 |
| CDY04276 | Canola | nucleus | 25.83 | 35.19 |
| GSMUA_Achr8P10740_001 | Banana | nucleus | 28.13 | 35.14 |
| CDY07352 | Canola | nucleus | 25.83 | 34.95 |
| CDX99859 | Canola | nucleus | 24.3 | 34.8 |
| CDX83415 | Canola | nucleus, plastid | 16.62 | 34.57 |
| CDY26310 | Canola | nucleus | 24.04 | 34.43 |
| CDX95947 | Canola | nucleus | 25.83 | 34.35 |
| CDY40910 | Canola | nucleus | 25.83 | 34.35 |
| CDX95615 | Canola | nucleus, plastid | 16.62 | 34.21 |
| CDY44466 | Canola | nucleus | 15.35 | 34.09 |
| CDY43194 | Canola | nucleus | 24.04 | 33.94 |
| CDX76541 | Canola | nucleus | 25.32 | 33.67 |
| CDY37794 | Canola | nucleus | 26.85 | 33.55 |
| CDX80094 | Canola | nucleus | 27.11 | 33.54 |
| CDY39732 | Canola | nucleus | 15.09 | 33.52 |
| CDX98155 | Canola | nucleus | 24.3 | 33.45 |
| CDY05537 | Canola | nucleus | 14.32 | 33.33 |
| CDY09083 | Canola | nucleus | 26.6 | 33.23 |
| CDX90417 | Canola | nucleus | 26.6 | 33.23 |
| CDY50313 | Canola | nucleus | 26.09 | 33.01 |
| CDY08894 | Canola | nucleus | 24.81 | 32.99 |
| CDY01523 | Canola | nucleus | 25.83 | 32.37 |
| CDY43969 | Canola | nucleus | 26.09 | 32.18 |
| CDY24990 | Canola | nucleus | 13.81 | 31.95 |
| CDX78832 | Canola | nucleus | 25.06 | 31.82 |
| CDY51420 | Canola | nucleus | 26.34 | 31.79 |
| CDX99495 | Canola | nucleus | 25.06 | 31.41 |
| CDX88219 | Canola | nucleus | 14.07 | 31.25 |
| CDY27500 | Canola | nucleus | 26.6 | 31.23 |
| CDY38208 | Canola | nucleus | 14.83 | 31.18 |
| CDY34393 | Canola | nucleus | 15.09 | 31.05 |
| CDY48151 | Canola | nucleus | 13.55 | 30.99 |
| CDX87064 | Canola | nucleus | 13.55 | 30.99 |
| CDY25554 | Canola | nucleus | 14.83 | 30.85 |
| CDY71963 | Canola | nucleus | 16.88 | 30.84 |
| CDY48258 | Canola | nucleus | 16.88 | 30.7 |
| CDY52627 | Canola | nucleus | 13.81 | 30.68 |
| CDX76630 | Canola | nucleus | 23.27 | 30.64 |
| CDY11416 | Canola | nucleus | 23.27 | 30.54 |
| CDY30483 | Canola | nucleus | 17.14 | 30.45 |
| CDY03224 | Canola | nucleus | 24.81 | 30.22 |
| CDY55479 | Canola | nucleus | 14.32 | 30.11 |
| CDY33471 | Canola | nucleus | 24.81 | 30.03 |
| CDY35159 | Canola | nucleus | 24.55 | 29.91 |
| CDY23453 | Canola | nucleus | 16.62 | 29.82 |
| CDX77655 | Canola | nucleus | 24.55 | 29.72 |
| CDY18694 | Canola | nucleus | 13.04 | 29.48 |
| CDY14512 | Canola | nucleus | 14.58 | 27.67 |
| CDY08849 | Canola | nucleus | 14.58 | 27.67 |
| CDX81259 | Canola | nucleus | 13.81 | 27.14 |
| CDY31301 | Canola | nucleus | 13.04 | 25.89 |
| CDX87722 | Canola | nucleus | 19.95 | 24.92 |
| CDX72701 | Canola | nucleus | 17.39 | 24.11 |
| CDY12144 | Canola | nucleus | 18.16 | 24.07 |
| CDY41978 | Canola | nucleus | 18.16 | 23.83 |
| CDY53184 | Canola | nucleus | 17.39 | 23.21 |
| CDY46824 | Canola | nucleus | 12.79 | 17.24 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078EU90 | EnsemblPlants:CDY05620 | ProteinID:CDY05620 | ProteinID:CDY05620.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00120587001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF80 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF19CC | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g39170D
Coordinates
chrLK031963:-:214912..217393
Molecular Weight (calculated)
43684.1 Da
IEP (calculated)
6.999
GRAVY (calculated)
-0.945
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKIKEDHH QEQQKEEPNS TKNTETTTTS STHMMNLITT SDHHQMELAG NNMNLSSIFD IPISSPFAYS YFEDHSSNNP YSFLDLLRQD QHQFASSSNS
101: SSFSFNAFPL QNNTNHIFTY LPLSQPVTTK DESSEVVSTT PTSPNSTSFS SSSNEAANDN INKEVTVKDQ EDGDQHGPKG TKPQLKAKKK QQKKGREARF
201: AFLTKSDIDN LDDGYRWRKY GQKAVKNSPY PRSYYRCTTV GCGVKKRVER SSDDPSIVMT TYEGQHTHPS PMTPRGHIGM LTSPILDHGA TTASSSSSFS
301: IPQPRYLLSQ HHQPYNIMYN NSLSMINRSS SSDGSFVNPG SSSFHGFGCD MSQASTSTTS TIRDHGLLQD ILPSQIRSDT INTRTNEEDN K
101: SSFSFNAFPL QNNTNHIFTY LPLSQPVTTK DESSEVVSTT PTSPNSTSFS SSSNEAANDN INKEVTVKDQ EDGDQHGPKG TKPQLKAKKK QQKKGREARF
201: AFLTKSDIDN LDDGYRWRKY GQKAVKNSPY PRSYYRCTTV GCGVKKRVER SSDDPSIVMT TYEGQHTHPS PMTPRGHIGM LTSPILDHGA TTASSSSSFS
301: IPQPRYLLSQ HHQPYNIMYN NSLSMINRSS SSDGSFVNPG SSSFHGFGCD MSQASTSTTS TIRDHGLLQD ILPSQIRSDT INTRTNEEDN K
001: MEKKKEEDHH HQQQQQQQKE IKNTETKIEQ EQEQEQKQEI SQASSSSNMA NLVTSSDHHP LELAGNLSSI FDTSSLPFPY SYFEDHSSNN PNSFLDLLRQ
101: DHQFASSSNS SSFSFDAFPL PNNNNNTSFF TDLPLPQAES SEVVNTTPTS PNSTSVSSSS NEAANDNNSG KEVTVKDQEE GDQQQEQKGT KPQLKAKKKN
201: QKKAREARFA FLTKSDIDNL DDGYRWRKYG QKAVKNSPYP RSYYRCTTVG CGVKKRVERS SDDPSIVMTT YEGQHTHPFP MTPRGHIGML TSPILDHGAT
301: TASSSSFSIP QPRYLLTQHH QPYNMYNNNS LSMINRRSSD GTFVNPGPSS SFPGFGYDMS QASTSTSSSI RDHGLLQDIL PSQIRSDTIN TQTNEENKK
101: DHQFASSSNS SSFSFDAFPL PNNNNNTSFF TDLPLPQAES SEVVNTTPTS PNSTSVSSSS NEAANDNNSG KEVTVKDQEE GDQQQEQKGT KPQLKAKKKN
201: QKKAREARFA FLTKSDIDNL DDGYRWRKYG QKAVKNSPYP RSYYRCTTVG CGVKKRVERS SDDPSIVMTT YEGQHTHPFP MTPRGHIGML TSPILDHGAT
301: TASSSSFSIP QPRYLLTQHH QPYNMYNNNS LSMINRRSSD GTFVNPGPSS SFPGFGYDMS QASTSTSSSI RDHGLLQDIL PSQIRSDTIN TQTNEENKK
Arabidopsis Description
WRKY48Probable WRKY transcription factor 48 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGZ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.