Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022033.1-P | Field mustard | nucleus | 60.06 | 59.31 |
| CDY43969 | Canola | nucleus | 60.06 | 59.31 |
| CDY72079 | Canola | nucleus | 18.85 | 53.15 |
| CDX77655 | Canola | nucleus | 53.04 | 51.39 |
| CDY33471 | Canola | nucleus | 53.04 | 51.39 |
| AT5G46350.1 | Thale cress | nucleus | 52.72 | 50.61 |
| CDY03224 | Canola | nucleus | 50.48 | 49.22 |
| CDY35159 | Canola | nucleus | 50.48 | 49.22 |
| CDX76541 | Canola | nucleus | 41.85 | 44.56 |
| CDY08894 | Canola | nucleus | 41.53 | 44.22 |
| CDX78832 | Canola | nucleus | 41.85 | 42.53 |
| CDX99495 | Canola | nucleus | 42.17 | 42.31 |
| CDY01523 | Canola | nucleus | 41.85 | 41.99 |
| CDY09083 | Canola | nucleus | 41.21 | 41.21 |
| CDX90417 | Canola | nucleus | 41.21 | 41.21 |
| CDX77096 | Canola | nucleus | 17.25 | 37.5 |
| CDY26310 | Canola | nucleus | 30.35 | 34.8 |
| CDX99859 | Canola | nucleus | 30.03 | 34.43 |
| CDY43194 | Canola | nucleus | 30.03 | 33.94 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 34.19 | 33.54 |
| CDX97223 | Canola | nucleus | 15.65 | 33.33 |
| CDX69672 | Canola | nucleus | 15.65 | 33.33 |
| CDX70492 | Canola | nucleus | 15.65 | 33.33 |
| CDX78504 | Canola | nucleus | 15.65 | 33.33 |
| CDX83415 | Canola | nucleus, plastid | 19.81 | 32.98 |
| CDY48151 | Canola | nucleus | 17.89 | 32.75 |
| CDX95615 | Canola | nucleus, plastid | 19.81 | 32.63 |
| CDX98155 | Canola | nucleus | 29.07 | 32.04 |
| CDX87064 | Canola | nucleus | 17.25 | 31.58 |
| CDY05537 | Canola | nucleus | 16.93 | 31.55 |
| CDY24990 | Canola | nucleus | 16.93 | 31.36 |
| KRH58435 | Soybean | nucleus | 35.14 | 30.73 |
| CDY52627 | Canola | nucleus | 17.25 | 30.68 |
| CDX88219 | Canola | nucleus | 16.93 | 30.11 |
| CDY48258 | Canola | nucleus | 20.45 | 29.77 |
| CDY39732 | Canola | nucleus | 16.61 | 29.55 |
| CDY30483 | Canola | nucleus | 20.77 | 29.55 |
| CDY44466 | Canola | nucleus | 16.61 | 29.55 |
| CDY71963 | Canola | nucleus | 20.13 | 29.44 |
| CDY23453 | Canola | nucleus | 20.45 | 29.36 |
| KRH42308 | Soybean | nucleus | 34.5 | 29.11 |
| CDY25554 | Canola | nucleus | 17.25 | 28.72 |
| OQU78504 | Sorghum | nucleus | 23.96 | 28.63 |
| CDY34393 | Canola | nucleus | 17.25 | 28.42 |
| CDY38208 | Canola | nucleus | 16.61 | 27.96 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 26.52 | 27.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.24 | 27.43 |
| CDY55479 | Canola | nucleus | 16.29 | 27.42 |
| CDY37794 | Canola | nucleus | 26.52 | 26.52 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 24.92 | 26.44 |
| CDX80094 | Canola | nucleus | 26.52 | 26.27 |
| CDY51420 | Canola | nucleus | 26.52 | 25.62 |
| CDX76630 | Canola | nucleus | 24.28 | 25.59 |
| CDY04276 | Canola | nucleus | 23.32 | 25.44 |
| CDY27500 | Canola | nucleus | 26.84 | 25.23 |
| CDY07352 | Canola | nucleus | 23.0 | 24.91 |
| CDY11416 | Canola | nucleus | 23.64 | 24.83 |
| CDY54139 | Canola | nucleus | 23.32 | 24.5 |
| CDY18694 | Canola | nucleus | 13.42 | 24.28 |
| CDX95947 | Canola | nucleus | 22.36 | 23.81 |
| CDY40910 | Canola | nucleus | 22.36 | 23.81 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 21.73 | 23.78 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 21.73 | 23.69 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 22.36 | 23.65 |
| Os05t0583000-01 | Rice | nucleus | 24.92 | 23.15 |
| CDY50313 | Canola | nucleus | 22.68 | 22.98 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 20.77 | 22.57 |
| CDY53184 | Canola | nucleus | 21.09 | 22.53 |
| CDX72701 | Canola | nucleus | 19.81 | 21.99 |
| CDY72613 | Canola | nucleus | 22.68 | 21.98 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 21.41 | 21.82 |
| CDY41978 | Canola | nucleus | 20.77 | 21.81 |
| CDY12144 | Canola | nucleus | 20.45 | 21.69 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 21.09 | 21.36 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 21.09 | 21.15 |
| CDX81259 | Canola | nucleus | 13.1 | 20.6 |
| CDY05620 | Canola | nucleus | 24.92 | 19.95 |
| CDY08849 | Canola | nucleus | 13.1 | 19.9 |
| CDY14512 | Canola | nucleus | 13.1 | 19.9 |
| CDX85413 | Canola | nucleus | 25.24 | 19.8 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 12.78 | 19.23 |
| CDY31301 | Canola | nucleus | 11.82 | 18.78 |
| CDY46824 | Canola | nucleus | 12.14 | 13.1 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DFE8 | EnsemblPlants:CDX87722 | ProteinID:CDX87722 | ProteinID:CDX87722.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00146759001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF83 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE5884 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g32270D
Coordinates
chrLK031851:+:554513..562537
Molecular Weight (calculated)
36720.7 Da
IEP (calculated)
10.045
GRAVY (calculated)
-0.746
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVYAWFARK DKCQVSADKY EILKIITKIG KNGISPFLCY DGLRAEREKR KPTLELGKDG FRPGLKGTCL GPYQEYILHL SKSWSWLYEE VVQVSPRNKT
101: DCFSFFMSFS HCSLFRTLLS FLVRLSPSFD PSFVGPVRHI RQRSKDFRVK TKKKEEKKQR EPRVSFVTKT EVEHLEDGYR WRKYGQKAVK NSPYPRSYYR
201: CTTQKCNVKK RVERSYQDPT VVITTYESQH NHPIPTSRRS ALFSGPTTSN YNSPVSDLII NTPRSFSNDD LLRVPYAAVN VNANYQQQQN QEFQNDYELL
301: KDMFPSVFFK QEP
101: DCFSFFMSFS HCSLFRTLLS FLVRLSPSFD PSFVGPVRHI RQRSKDFRVK TKKKEEKKQR EPRVSFVTKT EVEHLEDGYR WRKYGQKAVK NSPYPRSYYR
201: CTTQKCNVKK RVERSYQDPT VVITTYESQH NHPIPTSRRS ALFSGPTTSN YNSPVSDLII NTPRSFSNDD LLRVPYAAVN VNANYQQQQN QEFQNDYELL
301: KDMFPSVFFK QEP
001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
Arabidopsis Description
WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.