Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031900.1-P | Field mustard | nucleus | 60.34 | 88.83 |
| CDY31301 | Canola | nucleus | 60.34 | 88.83 |
| CDY08849 | Canola | nucleus | 50.69 | 71.36 |
| CDY14512 | Canola | nucleus | 50.34 | 70.87 |
| CDY18694 | Canola | nucleus | 41.72 | 69.94 |
| CDX81259 | Canola | nucleus | 47.24 | 68.84 |
| PGSC0003DMT400083306 | Potato | nucleus | 18.97 | 53.92 |
| PGSC0003DMT400080128 | Potato | extracellular | 19.66 | 41.3 |
| VIT_07s0031g01710.t01 | Wine grape | nucleus | 24.48 | 39.44 |
| Solyc04g051690.2.1 | Tomato | nucleus | 22.76 | 37.93 |
| KRH43323 | Soybean | nucleus | 23.79 | 37.5 |
| Solyc12g056750.1.1 | Tomato | nucleus | 24.14 | 37.23 |
| KRH59457 | Soybean | nucleus | 24.14 | 37.23 |
| CDY72079 | Canola | nucleus | 14.14 | 36.94 |
| CDX87064 | Canola | nucleus | 21.72 | 36.84 |
| KRH64140 | Soybean | nucleus | 24.83 | 36.73 |
| KRH53804 | Soybean | nucleus | 24.14 | 35.71 |
| CDY05537 | Canola | nucleus | 20.69 | 35.71 |
| CDY48151 | Canola | nucleus | 21.03 | 35.67 |
| CDY52627 | Canola | nucleus | 21.38 | 35.23 |
| CDX88219 | Canola | nucleus | 21.03 | 34.66 |
| GSMUA_Achr7P23980_001 | Banana | mitochondrion | 20.0 | 34.32 |
| CDY24990 | Canola | nucleus | 20.0 | 34.32 |
| PGSC0003DMT400059673 | Potato | nucleus | 24.48 | 33.33 |
| GSMUA_Achr8P26240_001 | Banana | nucleus | 18.97 | 31.98 |
| GSMUA_Achr4P08880_001 | Banana | nucleus | 17.24 | 30.3 |
| CDX70492 | Canola | nucleus | 15.17 | 29.93 |
| CDX78504 | Canola | nucleus | 15.17 | 29.93 |
| CDX77096 | Canola | nucleus | 14.83 | 29.86 |
| CDX69672 | Canola | nucleus | 14.83 | 29.25 |
| CDX97223 | Canola | nucleus | 14.83 | 29.25 |
| PGSC0003DMT400079980 | Potato | nucleus | 20.69 | 25.97 |
| CDY44466 | Canola | nucleus | 15.17 | 25.0 |
| CDY39732 | Canola | nucleus | 15.17 | 25.0 |
| Solyc04g072070.2.1 | Tomato | nucleus | 19.31 | 24.56 |
| CDY34393 | Canola | nucleus | 15.86 | 24.21 |
| CDY38208 | Canola | nucleus | 15.52 | 24.19 |
| CDY25554 | Canola | nucleus | 15.52 | 23.94 |
| CDY55479 | Canola | nucleus | 15.17 | 23.66 |
| CDX83415 | Canola | nucleus, plastid | 15.17 | 23.4 |
| CDX95615 | Canola | nucleus, plastid | 15.17 | 23.16 |
| CDY71963 | Canola | nucleus | 16.21 | 21.96 |
| CDY48258 | Canola | nucleus | 16.21 | 21.86 |
| CDY30483 | Canola | nucleus | 16.55 | 21.82 |
| CDY23453 | Canola | nucleus | 16.21 | 21.56 |
| CDX72701 | Canola | nucleus | 16.55 | 17.02 |
| CDY11416 | Canola | nucleus | 17.24 | 16.78 |
| CDY53184 | Canola | nucleus | 16.55 | 16.38 |
| CDY12144 | Canola | nucleus | 16.55 | 16.27 |
| CDY04276 | Canola | nucleus | 15.86 | 16.03 |
| CDY07352 | Canola | nucleus | 15.86 | 15.92 |
| CDX76630 | Canola | nucleus | 16.21 | 15.82 |
| CDY72613 | Canola | nucleus | 17.59 | 15.79 |
| CDY26310 | Canola | nucleus | 14.83 | 15.75 |
| CDX95947 | Canola | nucleus | 15.86 | 15.65 |
| CDY40910 | Canola | nucleus | 15.86 | 15.65 |
| CDY43194 | Canola | nucleus | 14.83 | 15.52 |
| CDX98155 | Canola | nucleus | 15.17 | 15.49 |
| CDY41978 | Canola | nucleus | 15.86 | 15.44 |
| CDX99859 | Canola | nucleus | 14.48 | 15.38 |
| CDY54139 | Canola | nucleus | 15.52 | 15.1 |
| CDY01523 | Canola | nucleus | 16.21 | 15.06 |
| CDX76541 | Canola | nucleus | 15.17 | 14.97 |
| CDY37794 | Canola | nucleus | 15.86 | 14.7 |
| CDY09083 | Canola | nucleus | 15.86 | 14.7 |
| CDX90417 | Canola | nucleus | 15.86 | 14.7 |
| CDY50313 | Canola | nucleus | 15.52 | 14.56 |
| CDX80094 | Canola | nucleus | 15.86 | 14.56 |
| CDY51420 | Canola | nucleus | 16.21 | 14.51 |
| CDY08894 | Canola | nucleus | 14.48 | 14.29 |
| CDX78832 | Canola | nucleus | 15.17 | 14.29 |
| CDY27500 | Canola | nucleus | 16.21 | 14.11 |
| CDX99495 | Canola | nucleus | 15.17 | 14.1 |
| CDY43969 | Canola | nucleus | 15.17 | 13.88 |
| CDY33471 | Canola | nucleus | 15.17 | 13.62 |
| CDX77655 | Canola | nucleus | 15.17 | 13.62 |
| CDY03224 | Canola | nucleus | 14.48 | 13.08 |
| CDY35159 | Canola | nucleus | 14.48 | 13.08 |
| CDY05620 | Canola | nucleus | 17.24 | 12.79 |
| CDX85413 | Canola | nucleus | 17.24 | 12.53 |
| CDX87722 | Canola | nucleus | 13.1 | 12.14 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078IBT8 | UniProt:A0A078IBT8 | EnsemblPlants:CDY46824 | ProteinID:CDY46824 |
| ProteinID:CDY46824.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00086266001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF48 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EBADA3 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
Description
BnaC02g43320DBnaC02g43320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBT8]
Coordinates
chrLK032686:+:165274..168197
Molecular Weight (calculated)
32745.1 Da
IEP (calculated)
5.690
GRAVY (calculated)
-0.723
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPSQSPSPN FTFLSDENSI YSFMDNYDFS NLMFSVGEGG NNGLIQEETS SPTTFVTGES GGSGSALTTL RKKESTSLDC KNRGSKDGET KEMGHRVAIR
101: TRTKIDVMDD GYKWRKYGKK SVKNNTNKRN YYKCSSEGCM VKKRVERDGE NAAYVITTYE GVHNHESPSH VYYSDMESEV ARVSPEALFL LGLDWNRHAG
201: DLIEQCENEG SVGRERERAD LGAIMWPKFE SLVVADSAGS SWFRFRVSTD VIAGLVTWMI LDHGYGNKRK IWKEDYEEFL HAVVYKEDGT
101: TRTKIDVMDD GYKWRKYGKK SVKNNTNKRN YYKCSSEGCM VKKRVERDGE NAAYVITTYE GVHNHESPSH VYYSDMESEV ARVSPEALFL LGLDWNRHAG
201: DLIEQCENEG SVGRERERAD LGAIMWPKFE SLVVADSAGS SWFRFRVSTD VIAGLVTWMI LDHGYGNKRK IWKEDYEEFL HAVVYKEDGT
001: MNISQNPSPN FTYFSDENFI NPFMDNNDFS NLMFFDIDEG GNNGLIEEEI SSPTSIVSSE TFTGESGGSG SATTLSKKES TNRGSKESDQ TKETGHRVAF
101: RTRSKIDVMD DGFKWRKYGK KSVKNNINKR NYYKCSSEGC SVKKRVERDG DDAAYVITTY EGVHNHESLS NVYYNEMVLS YDHDNWNQHS LLRS
101: RTRSKIDVMD DGFKWRKYGK KSVKNNINKR NYYKCSSEGC SVKKRVERDG DDAAYVITTY EGVHNHESLS NVYYNEMVLS YDHDNWNQHS LLRS
Arabidopsis Description
WRKY51Probable WRKY transcription factor 51 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.