Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34393 | Canola | nucleus | 97.34 | 96.32 |
| Bra027675.1-P | Field mustard | nucleus | 96.81 | 96.3 |
| CDY38208 | Canola | nucleus | 86.7 | 87.63 |
| CDY55479 | Canola | nucleus | 86.7 | 87.63 |
| AT1G64000.1 | Thale cress | nucleus | 85.11 | 82.05 |
| CDY44466 | Canola | nucleus | 64.89 | 69.32 |
| CDY39732 | Canola | nucleus | 63.83 | 68.18 |
| TraesCS1A01G348600.1 | Wheat | plastid | 41.49 | 57.78 |
| TraesCS1D01G351600.1 | Wheat | plastid | 41.49 | 57.78 |
| CDY72079 | Canola | nucleus | 28.19 | 47.75 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 45.21 | 47.22 |
| CDX78504 | Canola | nucleus | 36.17 | 46.26 |
| CDX70492 | Canola | nucleus | 36.17 | 46.26 |
| CDX97223 | Canola | nucleus | 36.17 | 46.26 |
| CDX69672 | Canola | nucleus | 35.64 | 45.58 |
| KRH00862 | Soybean | cytosol | 45.21 | 44.27 |
| KRH40372 | Soybean | cytosol | 43.62 | 42.71 |
| VIT_15s0046g02150.t01 | Wine grape | nucleus, plastid | 45.21 | 42.29 |
| CDX77096 | Canola | nucleus | 31.91 | 41.67 |
| Zm00001d012789_P001 | Maize | nucleus | 46.28 | 38.33 |
| Zm00001d038761_P002 | Maize | nucleus | 44.15 | 38.07 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 44.15 | 37.39 |
| Zm00001d010805_P001 | Maize | nucleus | 45.21 | 37.12 |
| PGSC0003DMT400032090 | Potato | nucleus | 44.68 | 36.84 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 43.09 | 36.49 |
| EES01425 | Sorghum | nucleus | 47.34 | 36.18 |
| Solyc08g081630.1.1 | Tomato | nucleus | 44.15 | 35.93 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 43.09 | 35.68 |
| TraesCS1B01G363200.1 | Wheat | nucleus | 43.09 | 35.37 |
| EES19853 | Sorghum | nucleus, plastid | 44.68 | 34.85 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 42.55 | 34.63 |
| Os01t0734000-01 | Rice | nucleus | 45.74 | 33.86 |
| CDY05537 | Canola | nucleus | 26.6 | 29.76 |
| CDY24990 | Canola | nucleus | 26.6 | 29.59 |
| CDY18694 | Canola | nucleus | 26.6 | 28.9 |
| CDX83415 | Canola | nucleus, plastid | 28.19 | 28.19 |
| CDX95615 | Canola | nucleus, plastid | 28.19 | 27.89 |
| CDX88219 | Canola | nucleus | 25.53 | 27.27 |
| CDX87064 | Canola | nucleus | 24.47 | 26.9 |
| HORVU1Hr1G081570.1 | Barley | plastid | 43.62 | 26.8 |
| CDY48151 | Canola | nucleus | 23.94 | 26.32 |
| CDY52627 | Canola | nucleus | 24.47 | 26.14 |
| CDY71963 | Canola | nucleus | 28.19 | 24.77 |
| CDY48258 | Canola | nucleus | 28.19 | 24.65 |
| CDX81259 | Canola | nucleus | 26.06 | 24.62 |
| CDY30483 | Canola | nucleus | 28.19 | 24.09 |
| CDY23453 | Canola | nucleus | 27.66 | 23.85 |
| CDY31301 | Canola | nucleus | 24.47 | 23.35 |
| CDY14512 | Canola | nucleus | 24.47 | 22.33 |
| CDY08849 | Canola | nucleus | 24.47 | 22.33 |
| CDY26310 | Canola | nucleus | 29.26 | 20.15 |
| CDY43194 | Canola | nucleus | 29.26 | 19.86 |
| CDX99859 | Canola | nucleus | 28.72 | 19.78 |
| CDX72701 | Canola | nucleus | 29.26 | 19.5 |
| CDX98155 | Canola | nucleus | 29.26 | 19.37 |
| CDY12144 | Canola | nucleus | 29.79 | 18.98 |
| CDY53184 | Canola | nucleus | 29.26 | 18.77 |
| CDY08894 | Canola | nucleus | 29.26 | 18.71 |
| CDY41978 | Canola | nucleus | 29.26 | 18.46 |
| CDX76541 | Canola | nucleus | 28.72 | 18.37 |
| CDY37794 | Canola | nucleus | 30.32 | 18.21 |
| CDY04276 | Canola | nucleus | 27.66 | 18.12 |
| CDY07352 | Canola | nucleus | 27.66 | 17.99 |
| CDY11416 | Canola | nucleus | 28.19 | 17.79 |
| CDX80094 | Canola | nucleus | 29.79 | 17.72 |
| CDX95947 | Canola | nucleus | 27.66 | 17.69 |
| CDY40910 | Canola | nucleus | 27.66 | 17.69 |
| CDY72613 | Canola | nucleus | 30.32 | 17.65 |
| CDX76630 | Canola | nucleus | 27.66 | 17.51 |
| CDY54139 | Canola | nucleus | 27.66 | 17.45 |
| CDX87722 | Canola | nucleus | 28.72 | 17.25 |
| CDX78832 | Canola | nucleus | 28.19 | 17.21 |
| CDX99495 | Canola | nucleus | 28.19 | 16.99 |
| CDY51420 | Canola | nucleus | 29.26 | 16.98 |
| CDY01523 | Canola | nucleus | 27.66 | 16.67 |
| CDX90417 | Canola | nucleus | 27.66 | 16.61 |
| CDY09083 | Canola | nucleus | 27.66 | 16.61 |
| CDY27500 | Canola | nucleus | 29.26 | 16.52 |
| CDY33471 | Canola | nucleus | 28.19 | 16.41 |
| CDX77655 | Canola | nucleus | 28.19 | 16.41 |
| CDY50313 | Canola | nucleus | 26.6 | 16.18 |
| CDY43969 | Canola | nucleus | 27.13 | 16.09 |
| CDY46824 | Canola | nucleus | 23.94 | 15.52 |
| CDY03224 | Canola | nucleus | 26.06 | 15.26 |
| CDY35159 | Canola | nucleus | 26.06 | 15.26 |
| CDY05620 | Canola | nucleus | 30.85 | 14.83 |
| CDX85413 | Canola | nucleus | 31.38 | 14.79 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GJZ7 | UniProt:A0A078GJZ7 | EnsemblPlants:CDY25554 | ProteinID:CDY25554 |
| ProteinID:CDY25554.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00032812001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF7 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE6D7D | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g11790DBnaC09g11790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJZ7]
Coordinates
chrLK032176:+:506248..507825
Molecular Weight (calculated)
21111.8 Da
IEP (calculated)
6.946
GRAVY (calculated)
-0.743
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVDDTNPT LTLEEGENNP FSSFDKTLMM MDPSLMFSSD MGASSSCSPA SFHMSAQPEN FQHAEGGDAV EIGGLSDHNK NSKGKGKISS AMQRIAFHTR
101: SDDDVLDDGY RWRKYGQKSV KNNAHPRSYY RCTYHTCNVK KQVQRLAKDP KVVVTTYEGV HNHPCEKLME TLSPLLRQLQ FLTRVSDL
101: SDDDVLDDGY RWRKYGQKSV KNNAHPRSYY RCTYHTCNVK KQVQRLAKDP KVVVTTYEGV HNHPCEKLME TLSPLLRQLQ FLTRVSDL
001: MEGVDNTNPM LTLEEGENNN PFSSLDDKTL MMMAPSLIFS GDVGPSSSSC TPAGYHLSAQ LENFRGGGGE MGGLVSNNSN NSDHNKNCNK GKGKRTLAMQ
101: RIAFHTRSDD DVLDDGYRWR KYGQKSVKNN AHPRSYYRCT YHTCNVKKQV QRLAKDPNVV VTTYEGVHNH PCEKLMETLS PLLRQLQFLS RVSDL
101: RIAFHTRSDD DVLDDGYRWR KYGQKSVKNN AHPRSYYRCT YHTCNVKKQV QRLAKDPNVV VTTYEGVHNH PCEKLMETLS PLLRQLQFLS RVSDL
Arabidopsis Description
WRKY56At1g64000 [Source:UniProtKB/TrEMBL;Acc:Q29PS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.