Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032090 | Potato | nucleus | 94.81 | 96.05 |
| TraesCS1D01G351600.1 | Wheat | plastid | 34.63 | 59.26 |
| TraesCS1A01G348600.1 | Wheat | plastid | 34.2 | 58.52 |
| KRH00862 | Soybean | cytosol | 45.89 | 55.21 |
| KRH40372 | Soybean | cytosol | 45.02 | 54.17 |
| VIT_15s0046g02150.t01 | Wine grape | nucleus, plastid | 46.75 | 53.73 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 38.1 | 48.89 |
| Bra025490.1-P | Field mustard | nucleus | 36.8 | 48.85 |
| AT5G41570.1 | Thale cress | nucleus | 37.66 | 48.6 |
| CDY39732 | Canola | nucleus | 36.8 | 48.3 |
| CDY44466 | Canola | nucleus | 36.36 | 47.73 |
| Solyc02g094270.1.1 | Tomato | nucleus | 25.97 | 45.8 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 43.72 | 45.5 |
| Bra027768.1-P | Field mustard | nucleus | 36.36 | 44.92 |
| CDY38208 | Canola | nucleus | 35.93 | 44.62 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 42.86 | 44.59 |
| Zm00001d012789_P001 | Maize | nucleus | 43.72 | 44.49 |
| Bra027675.1-P | Field mustard | nucleus | 36.36 | 44.44 |
| CDY25554 | Canola | nucleus | 35.93 | 44.15 |
| CDY55479 | Canola | nucleus | 35.5 | 44.09 |
| CDY34393 | Canola | nucleus | 35.93 | 43.68 |
| AT1G64000.1 | Thale cress | nucleus | 36.8 | 43.59 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 42.42 | 42.42 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 40.26 | 40.97 |
| EES01425 | Sorghum | nucleus | 42.86 | 40.24 |
| Zm00001d038761_P002 | Maize | nucleus | 37.66 | 39.91 |
| Os01t0734000-01 | Rice | nucleus | 43.72 | 39.76 |
| Zm00001d010805_P001 | Maize | nucleus | 38.96 | 39.3 |
| Solyc05g015850.2.1 | Tomato | nucleus | 28.57 | 38.37 |
| TraesCS1B01G363200.1 | Wheat | nucleus | 37.23 | 37.55 |
| EES19853 | Sorghum | nucleus, plastid | 38.96 | 37.34 |
| Solyc04g051690.2.1 | Tomato | nucleus | 22.51 | 29.89 |
| HORVU1Hr1G081570.1 | Barley | plastid | 39.39 | 29.74 |
| Solyc08g062490.2.1 | Tomato | nucleus | 22.94 | 29.28 |
| Solyc01g089960.2.1 | Tomato | nucleus | 25.54 | 25.0 |
| Solyc04g051540.2.1 | Tomato | nucleus | 23.81 | 23.5 |
| Solyc05g053380.2.1 | Tomato | nucleus | 25.97 | 20.34 |
| Solyc01g079260.2.1 | Tomato | nucleus | 27.27 | 19.69 |
| Solyc12g056750.1.1 | Tomato | nucleus | 15.58 | 19.15 |
| Solyc07g056280.2.1 | Tomato | nucleus | 26.41 | 18.94 |
| Solyc02g071130.2.1 | Tomato | nucleus | 25.54 | 18.61 |
| Solyc04g072070.2.1 | Tomato | nucleus | 17.75 | 17.98 |
| Solyc01g058540.2.1 | Tomato | nucleus | 24.68 | 17.59 |
| Solyc12g011200.1.1 | Tomato | nucleus | 25.11 | 17.31 |
| Solyc05g012500.2.1 | Tomato | nucleus | 24.24 | 17.13 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:K4CPF9 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF7 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:Solyc08g081630.1 | EnsemblPlants:Solyc08g081630.1.1 |
| UniParc:UPI000276C0DF | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr8:+:64621281..64623385
Molecular Weight (calculated)
26408.5 Da
IEP (calculated)
8.955
GRAVY (calculated)
-0.807
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYNNSTLLS MDAGEELHLP PPPPPPPLPP PTTLLSPANF YMQQPNDQLA MQNNCNSSQV GLICDNIDWA GLLSGSSSIN NNNESIATTP NVSINPRNMN
101: MNTNMNMMEG GEQHQQPLLQ LQEHNFRREK GRKRKYVPPR VAFHTRSTED ILDDGFKWRK YGQKAVKNST HPRSYYRCTH HTCNVKKQIQ RLSKDTSIVV
201: TTYEGIHNHP CEKLMETLSP ILKQLQFLSR F
101: MNTNMNMMEG GEQHQQPLLQ LQEHNFRREK GRKRKYVPPR VAFHTRSTED ILDDGFKWRK YGQKAVKNST HPRSYYRCTH HTCNVKKQIQ RLSKDTSIVV
201: TTYEGIHNHP CEKLMETLSP ILKQLQFLSR F
001: MEGVDNTNPM LTLEEGENNN PFSSLDDKTL MMMAPSLIFS GDVGPSSSSC TPAGYHLSAQ LENFRGGGGE MGGLVSNNSN NSDHNKNCNK GKGKRTLAMQ
101: RIAFHTRSDD DVLDDGYRWR KYGQKSVKNN AHPRSYYRCT YHTCNVKKQV QRLAKDPNVV VTTYEGVHNH PCEKLMETLS PLLRQLQFLS RVSDL
101: RIAFHTRSDD DVLDDGYRWR KYGQKSVKNN AHPRSYYRCT YHTCNVKKQV QRLAKDPNVV VTTYEGVHNH PCEKLMETLS PLLRQLQFLS RVSDL
Arabidopsis Description
WRKY56At1g64000 [Source:UniProtKB/TrEMBL;Acc:Q29PS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.