Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052057 | Potato | nucleus | 83.97 | 78.01 |
| VIT_17s0000g01280.t01 | Wine grape | nucleus | 58.02 | 50.33 |
| GSMUA_Achr9P29350_001 | Banana | nucleus | 58.78 | 48.43 |
| Solyc05g015850.2.1 | Tomato | nucleus | 63.36 | 48.26 |
| GSMUA_Achr9P01400_001 | Banana | nucleus | 65.65 | 47.51 |
| KRH41119 | Soybean | nucleus | 51.15 | 45.58 |
| GSMUA_AchrUn_... | Banana | nucleus | 60.31 | 44.63 |
| GSMUA_Achr6P06360_001 | Banana | nucleus | 58.02 | 41.3 |
| HORVU2Hr1G001780.1 | Barley | nucleus | 61.07 | 40.82 |
| TraesCS2A01G011000.1 | Wheat | nucleus | 61.07 | 39.02 |
| TraesCS2D01G011700.1 | Wheat | nucleus | 61.07 | 38.84 |
| KRH54160 | Soybean | nucleus | 47.33 | 38.75 |
| TraesCS2B01G010500.1 | Wheat | nucleus | 60.31 | 38.54 |
| Zm00001d007329_P001 | Maize | nucleus | 62.6 | 37.27 |
| EES08501 | Sorghum | nucleus | 61.07 | 35.56 |
| Os11t0490900-01 | Rice | nucleus | 64.89 | 35.12 |
| Zm00001d049173_P001 | Maize | nucleus | 61.07 | 34.93 |
| Solyc08g081630.1.1 | Tomato | nucleus | 45.8 | 25.97 |
| Solyc08g062490.2.1 | Tomato | nucleus | 35.11 | 25.41 |
| Solyc04g051690.2.1 | Tomato | nucleus | 32.82 | 24.71 |
| Solyc01g089960.2.1 | Tomato | nucleus | 39.69 | 22.03 |
| Solyc04g051540.2.1 | Tomato | nucleus | 38.17 | 21.37 |
| Solyc12g056750.1.1 | Tomato | nucleus | 28.24 | 19.68 |
| Solyc01g079260.2.1 | Tomato | nucleus | 46.56 | 19.06 |
| Solyc05g053380.2.1 | Tomato | nucleus | 42.75 | 18.98 |
| Solyc02g071130.2.1 | Tomato | nucleus | 44.27 | 18.3 |
| Solyc07g056280.2.1 | Tomato | nucleus | 44.27 | 18.01 |
| Solyc05g012500.2.1 | Tomato | nucleus | 44.27 | 17.74 |
| Solyc04g072070.2.1 | Tomato | nucleus | 30.53 | 17.54 |
| Solyc12g011200.1.1 | Tomato | nucleus | 42.75 | 16.72 |
| Solyc01g058540.2.1 | Tomato | nucleus | 41.22 | 16.67 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:K4BDM2 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF25 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:Solyc02g094270.1 | EnsemblPlants:Solyc02g094270.1.1 |
| UniParc:UPI0002768AA7 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : | : |
Description
No Description!
Coordinates
chr2:-:54848158..54850632
Molecular Weight (calculated)
15468.5 Da
IEP (calculated)
9.954
GRAVY (calculated)
-0.950
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MDINDVVVGS VSERMQNDHR NLLSVKNKKI KKPRFAFQTK SQVDILDDGY RWRKYGQKAV KNNNYPRSYY RCTHEGCNVK KQVQRLSKDE TVVVTTYEGM
101: HTHPIQKPND NFEQILHQMH IFPNPPCHLI N
101: HTHPIQKPND NFEQILHQMH IFPNPPCHLI N
001: MEGYDNGSLY APFLSLKSHS KPELHQGEEE SSKVRSEGCS KSVESSKKKG KKQRYAFQTR SQVDILDDGY RWRKYGQKAV KNNKFPRSYY RCTYGGCNVK
101: KQVQRLTVDQ EVVVTTYEGV HSHPIEKSTE NFEHILTQMQ IYSSF
101: KQVQRLTVDQ EVVVTTYEGV HSHPIEKSTE NFEHILTQMQ IYSSF
Arabidopsis Description
WRKY75WRKY75 [Source:UniProtKB/TrEMBL;Acc:A0A178UJF4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.