Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44466 | Canola | nucleus | 82.12 | 83.52 |
| CDY39732 | Canola | nucleus | 81.56 | 82.95 |
| Bra025490.1-P | Field mustard | nucleus | 79.89 | 82.18 |
| AT1G64000.1 | Thale cress | nucleus | 72.07 | 66.15 |
| AT2G46130.1 | Thale cress | nucleus | 40.22 | 66.06 |
| TraesCS1D01G351600.1 | Wheat | plastid | 44.13 | 58.52 |
| TraesCS1A01G348600.1 | Wheat | plastid | 44.13 | 58.52 |
| AT5G13080.1 | Thale cress | nucleus, plastid | 39.66 | 48.97 |
| KRH00862 | Soybean | cytosol | 49.72 | 46.35 |
| KRH40372 | Soybean | cytosol | 48.04 | 44.79 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 44.13 | 43.89 |
| AT3G01970.1 | Thale cress | nucleus | 35.75 | 43.54 |
| VIT_15s0046g02150.t01 | Wine grape | nucleus, plastid | 47.49 | 42.29 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 48.04 | 38.74 |
| PGSC0003DMT400032090 | Potato | nucleus | 48.6 | 38.16 |
| Zm00001d038761_P002 | Maize | nucleus | 46.37 | 38.07 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 46.93 | 37.84 |
| Solyc08g081630.1.1 | Tomato | nucleus | 48.6 | 37.66 |
| Zm00001d012789_P001 | Maize | nucleus | 46.93 | 37.0 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 46.93 | 36.36 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 45.81 | 36.12 |
| Zm00001d010805_P001 | Maize | nucleus | 45.81 | 35.81 |
| TraesCS1B01G363200.1 | Wheat | nucleus | 45.81 | 35.81 |
| EES19853 | Sorghum | nucleus, plastid | 48.04 | 35.68 |
| EES01425 | Sorghum | nucleus | 46.93 | 34.15 |
| Os01t0734000-01 | Rice | nucleus | 48.04 | 33.86 |
| AT5G26170.1 | Thale cress | nucleus | 27.37 | 28.32 |
| HORVU1Hr1G081570.1 | Barley | plastid | 46.37 | 27.12 |
| AT2G44745.1 | Thale cress | nucleus | 30.17 | 24.77 |
| AT5G64810.1 | Thale cress | nucleus | 25.14 | 23.2 |
| AT3G62340.1 | Thale cress | nucleus | 31.84 | 20.58 |
| AT1G29860.1 | Thale cress | nucleus | 31.28 | 19.86 |
| AT1G69310.2 | Thale cress | nucleus | 31.28 | 19.51 |
| AT4G39410.1 | Thale cress | nucleus | 31.28 | 18.42 |
| AT4G18170.1 | Thale cress | nucleus | 30.73 | 17.3 |
| AT5G46350.1 | Thale cress | nucleus | 30.73 | 16.87 |
| AT2G47260.1 | Thale cress | nucleus | 30.73 | 16.32 |
| AT5G49520.1 | Thale cress | nucleus | 34.08 | 15.29 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:834159 | ProteinID:AED94693.1 | EMBL:AF404864 | EMBL:AK227522 |
| ArrayExpress:AT5G41570 | EnsemblPlantsGene:AT5G41570 | RefSeq:AT5G41570 | TAIR:AT5G41570 | RefSeq:AT5G41570-TAIR-G | EnsemblPlants:AT5G41570.1 |
| TAIR:AT5G41570.1 | ProteinID:BAB11463.1 | EMBL:BT004595 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_198972.1 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF7 | UniProt:Q0WTM6 | UniProt:Q9FFS3 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000000C3D0 | Symbol:WRKY24 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
WRKY24Probable WRKY transcription factor 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFS3]
Coordinates
chr5:+:16624157..16625977
Molecular Weight (calculated)
20813.6 Da
IEP (calculated)
8.467
GRAVY (calculated)
-0.892
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MDREDINPML SRLDVENNNT FSSFVDKTLM MMPPSTFSGE VEPSSSSSWY PESFHVHAPP LPPENDQIGE KGKELKEKRS RKVPRIAFHT RSDDDVLDDG
101: YRWRKYGQKS VKHNAHPRSY YRCTYHTCNV KKQVQRLAKD PNVVVTTYEG VHNHPCEKLM ETLNPLLRQL QFLSSFSNL
101: YRWRKYGQKS VKHNAHPRSY YRCTYHTCNV KKQVQRLAKD PNVVVTTYEG VHNHPCEKLM ETLNPLLRQL QFLSSFSNL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.