Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G280200.1 | Wheat | nucleus | 87.01 | 90.54 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 87.01 | 90.54 |
| AT2G46130.1 | Thale cress | nucleus | 32.03 | 67.89 |
| Zm00001d012789_P001 | Maize | nucleus | 54.98 | 55.95 |
| Os01t0734000-01 | Rice | nucleus | 60.61 | 55.12 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 41.56 | 53.33 |
| EES01425 | Sorghum | nucleus | 55.84 | 52.44 |
| VIT_15s0046g02150.t01 | Wine grape | nucleus, plastid | 44.59 | 51.24 |
| KRH00862 | Soybean | cytosol | 42.42 | 51.04 |
| KRH40372 | Soybean | cytosol | 42.42 | 51.04 |
| KRH06569 | Soybean | nucleus | 42.42 | 50.26 |
| AT5G41570.1 | Thale cress | nucleus | 36.36 | 46.93 |
| CDY44466 | Canola | nucleus | 35.5 | 46.59 |
| Bra025490.1-P | Field mustard | nucleus | 35.06 | 46.55 |
| CDY39732 | Canola | nucleus | 35.06 | 46.02 |
| Bra027768.1-P | Field mustard | nucleus | 34.63 | 42.78 |
| CDY25554 | Canola | nucleus | 34.63 | 42.55 |
| PGSC0003DMT400032090 | Potato | nucleus | 41.99 | 42.54 |
| CDY38208 | Canola | nucleus | 34.2 | 42.47 |
| Solyc08g081630.1.1 | Tomato | nucleus | 42.42 | 42.42 |
| Bra027675.1-P | Field mustard | nucleus | 34.63 | 42.33 |
| CDY34393 | Canola | nucleus | 34.63 | 42.11 |
| AT1G64000.1 | Thale cress | nucleus | 35.5 | 42.05 |
| CDY55479 | Canola | nucleus | 33.77 | 41.94 |
| HORVU1Hr1G081570.1 | Barley | plastid | 46.75 | 35.29 |
| HORVU2Hr1G001780.1 | Barley | nucleus | 29.87 | 35.2 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 25.54 | 29.65 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 27.27 | 27.75 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 26.41 | 26.52 |
| HORVU0Hr1G001430.1 | Barley | plastid | 24.68 | 26.15 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 23.81 | 25.94 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 26.84 | 21.75 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 28.57 | 21.36 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 22.51 | 21.14 |
| HORVU3Hr1G050590.3 | Barley | nucleus | 24.24 | 21.05 |
| HORVU3Hr1G021120.1 | Barley | nucleus, plastid | 23.38 | 20.45 |
| HORVU1Hr1G088300.1 | Barley | nucleus | 24.68 | 19.79 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 23.38 | 19.35 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 24.68 | 18.87 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 28.14 | 17.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:HORVU3Hr1G069660 | EnsemblPlants:HORVU3Hr1G069660.1 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M0WVB2 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF7 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000296F1D0 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:+:527940849..527946669
Molecular Weight (calculated)
25348.6 Da
IEP (calculated)
7.179
GRAVY (calculated)
-0.828
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDLHGDDEA HTFPRFPYFS APSASPPLAS PLASSSNDQH HSPLAAALQQ LTPPPWPCSP PDLTPQPMLP AMVELDWSSM FQMGPVAPPE QKEEQAAQAD
101: RTQGGENDGE AGGSGSGGKD REKAEGSAGR SGKKKVSKPR FAFQTRSEND ILDDGYRWRK YGQKAVKNSS NPRSYYRCTH PTCNVKKQVQ RLAKDTAIVV
201: TTYEGVHNHP CEKLMEALGP ILKQLQFLSQ F
101: RTQGGENDGE AGGSGSGGKD REKAEGSAGR SGKKKVSKPR FAFQTRSEND ILDDGYRWRK YGQKAVKNSS NPRSYYRCTH PTCNVKKQVQ RLAKDTAIVV
201: TTYEGVHNHP CEKLMEALGP ILKQLQFLSQ F
001: MDREDINPML SRLDVENNNT FSSFVDKTLM MMPPSTFSGE VEPSSSSSWY PESFHVHAPP LPPENDQIGE KGKELKEKRS RKVPRIAFHT RSDDDVLDDG
101: YRWRKYGQKS VKHNAHPRSY YRCTYHTCNV KKQVQRLAKD PNVVVTTYEG VHNHPCEKLM ETLNPLLRQL QFLSSFSNL
101: YRWRKYGQKS VKHNAHPRSY YRCTYHTCNV KKQVQRLAKD PNVVVTTYEG VHNHPCEKLM ETLNPLLRQL QFLSSFSNL
Arabidopsis Description
WRKY24Probable WRKY transcription factor 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFS3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.