Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G308700.1 | Wheat | cytosol | 96.03 | 95.39 |
| TraesCS1D01G308000.1 | Wheat | cytosol | 94.7 | 95.33 |
| TraesCS1B01G319300.1 | Wheat | cytosol | 94.7 | 95.33 |
| Os05t0491000-01 | Rice | cytosol | 76.16 | 74.19 |
| Zm00001d010649_P001 | Maize | extracellular | 62.25 | 66.2 |
| OQU78227 | Sorghum | cytosol | 71.52 | 60.34 |
| CDY04474 | Canola | cytosol | 45.7 | 46.31 |
| CDY56411 | Canola | cytosol | 45.7 | 46.31 |
| KRG94975 | Soybean | nucleus | 45.7 | 46.31 |
| Bra019453.1-P | Field mustard | cytosol | 45.7 | 46.31 |
| Bra012037.1-P | Field mustard | cytosol | 45.7 | 46.31 |
| CDY12321 | Canola | cytosol | 44.37 | 46.21 |
| Bra034981.1-P | Field mustard | cytosol | 44.37 | 46.21 |
| Solyc01g008950.2.1 | Tomato | nucleus | 45.03 | 45.64 |
| CDY55678 | Canola | cytosol | 45.03 | 45.64 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 45.03 | 45.64 |
| Solyc12g099990.1.1 | Tomato | nucleus | 45.03 | 45.64 |
| Solyc11g072240.1.1 | Tomato | cytosol | 45.03 | 45.64 |
| PGSC0003DMT400018569 | Potato | cytosol | 45.03 | 45.64 |
| Bra020155.1-P | Field mustard | cytosol | 45.03 | 45.64 |
| Solyc10g081170.1.1 | Tomato | extracellular | 45.03 | 45.64 |
| PGSC0003DMT400058435 | Potato | cytosol | 45.03 | 45.64 |
| Bra002368.1-P | Field mustard | cytosol | 45.03 | 45.64 |
| PGSC0003DMT400070437 | Potato | cytosol | 45.03 | 45.64 |
| Bra006595.1-P | Field mustard | cytosol | 45.03 | 45.64 |
| Solyc10g077010.1.1 | Tomato | cytosol | 45.03 | 45.64 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 45.7 | 45.1 |
| CDY65072 | Canola | cytosol | 44.37 | 44.97 |
| CDX99690 | Canola | cytosol | 44.37 | 44.97 |
| Bra014671.1-P | Field mustard | cytosol | 44.37 | 44.97 |
| Bra007269.1-P | Field mustard | cytosol | 44.37 | 44.97 |
| Bra004166.1-P | Field mustard | cytosol | 44.37 | 44.97 |
| Bra003251.1-P | Field mustard | cytosol | 44.37 | 44.97 |
| Bra000214.1-P | Field mustard | cytosol | 44.37 | 44.97 |
| AT5G21274.1 | Thale cress | cytosol | 44.37 | 44.97 |
| AT3G56800.1 | Thale cress | cytosol | 44.37 | 44.97 |
| CDX96148 | Canola | cytosol | 44.37 | 44.97 |
| CDX92401 | Canola | cytosol | 39.74 | 44.78 |
| CDY27651 | Canola | cytosol | 43.71 | 44.0 |
| PGSC0003DMT400046278 | Potato | cytosol | 21.85 | 42.86 |
| AT2G41110.2 | Thale cress | cytosol | 44.37 | 41.61 |
| Bra025438.1-P | Field mustard | cytosol | 31.13 | 41.59 |
| PGSC0003DMT400054299 | Potato | cytosol | 31.13 | 41.59 |
| AT1G66410.2 | Thale cress | cytosol | 43.71 | 41.51 |
| KRH18664 | Soybean | cytosol | 36.42 | 39.29 |
| CDY48191 | Canola | cytosol | 45.03 | 37.99 |
| Bra034317.1-P | Field mustard | cytosol | 45.03 | 37.99 |
| CDX77060 | Canola | cytosol | 45.03 | 37.78 |
| AT5G37780.3 | Thale cress | cytosol | 43.71 | 37.71 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 30.46 | 37.7 |
| HORVU3Hr1G079210.4 | Barley | cytosol | 45.7 | 37.5 |
| AT2G27030.3 | Thale cress | cytosol | 44.37 | 37.02 |
| KRG89812 | Soybean | cytosol, mitochondrion | 39.07 | 35.76 |
| HORVU5Hr1G014070.2 | Barley | cytosol | 37.75 | 34.34 |
| HORVU3Hr1G038010.1 | Barley | cytosol, plastid | 45.03 | 34.17 |
| CDY30947 | Canola | cytosol | 47.02 | 33.97 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 37.75 | 32.95 |
| CDX75970 | Canola | cytosol | 24.5 | 32.46 |
| AT3G43810.2 | Thale cress | cytosol | 45.7 | 32.24 |
| CDY21220 | Canola | cytosol | 46.36 | 31.67 |
| HORVU5Hr1G044710.4 | Barley | cytosol | 37.75 | 31.67 |
| HORVU2Hr1G016740.4 | Barley | cytosol | 45.03 | 31.63 |
| CDY57144 | Canola | cytosol | 27.81 | 28.77 |
| HORVU5Hr1G014060.1 | Barley | cytosol, plastid | 38.41 | 27.1 |
| AT2G41090.1 | Thale cress | cytosol | 31.13 | 24.61 |
| HORVU2Hr1G030640.1 | Barley | cytosol | 27.15 | 24.26 |
| HORVU7Hr1G113200.1 | Barley | cytosol | 28.48 | 23.76 |
| HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 33.11 | 22.62 |
| HORVU7Hr1G075240.1 | Barley | cytosol, plastid | 28.48 | 22.05 |
| HORVU1Hr1G080000.3 | Barley | cytosol | 26.49 | 21.39 |
| HORVU3Hr1G052770.1 | Barley | cytosol | 29.14 | 17.81 |
| AT2G41100.1 | Thale cress | cytosol | 33.11 | 15.43 |
| HORVU1Hr1G050720.2 | Barley | cytosol | 25.83 | 14.94 |
Protein Annotations
| EMBL:AK372068 | EnsemblPlants:HORVU0Hr1G001280.1 | EnsemblPlantsGene:HORVU0Hr1G001280 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF256 | PFAM:PF13405 | PFAM:PF13833 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0000E6ADF2 | UniProt:F2E7E4 | MapMan:35.1 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E7E4]
Coordinates
chrchrUn:+:6663125..6664148
Molecular Weight (calculated)
16060.9 Da
IEP (calculated)
4.277
GRAVY (calculated)
-0.299
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKLTREQA DECKEVFDLF DGDEDGRIAA GELVTALRSL GQNVDEAEAR GFLEDAGAGA GAAAVDLPTF LAVAARKASA GVSAKRLAEC LDAFDDDGSG
101: VIPAEQLRQV MLTHGDRLTE EEADELVRKA DPRGEGRVQC KELVKVLMNN K
101: VIPAEQLRQV MLTHGDRLTE EEADELVRKA DPRGEGRVQC KELVKVLMNN K
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.