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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:plasma membrane
TargetP:mitochondrion
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT4G02410.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
AT4G02410.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G364400.1 Wheat plasma membrane 89.68 91.95
Zm00001d019333_P001 Maize plasma membrane 73.55 73.33
HORVU3Hr1G018690.1 Barley plasma membrane 61.92 63.02
HORVU6Hr1G053120.1 Barley plasma membrane 59.88 61.68
HORVU3Hr1G018500.1 Barley plasma membrane 60.76 61.65
HORVU3Hr1G018610.1 Barley plasma membrane 60.61 61.41
HORVU5Hr1G098640.1 Barley plasma membrane 59.74 60.09
HORVU5Hr1G104850.2 Barley vacuole 51.89 60.0
HORVU2Hr1G091360.1 Barley plasma membrane 58.72 59.76
HORVU6Hr1G025350.1 Barley plasma membrane 59.16 59.5
HORVU6Hr1G053090.1 Barley cytosol, plasma membrane 61.05 59.32
HORVU7Hr1G028730.4 Barley plasma membrane 59.16 59.16
HORVU7Hr1G000830.1 Barley plasma membrane 58.72 58.05
HORVU7Hr1G000530.1 Barley plasma membrane 57.27 57.43
HORVU6Hr1G025340.4 Barley plasma membrane 58.87 56.88
HORVU1Hr1G037000.1 Barley plasma membrane 54.94 56.84
HORVU7Hr1G019400.2 Barley plasma membrane 55.52 56.76
HORVU2Hr1G037210.1 Barley plasma membrane 55.81 56.55
HORVU1Hr1G009250.16 Barley plasma membrane 56.98 56.16
HORVU2Hr1G037200.1 Barley plasma membrane 55.52 55.28
KRH49145 Soybean plasma membrane 53.34 55.02
CDX91325 Canola cytosol, mitochondrion 20.93 54.55
KRH00016 Soybean plasma membrane 52.76 54.42
PGSC0003DMT400022983 Potato plasma membrane 52.03 53.83
PGSC0003DMT400052365 Potato plasma membrane 51.89 53.6
HORVU7Hr1G019390.1 Barley plasma membrane 54.8 53.4
AT2G37710.1 Thale cress plasma membrane 52.33 53.33
VIT_08s0007g00810.t01 Wine grape plasma membrane 52.18 52.79
HORVU2Hr1G120660.8 Barley plasma membrane 52.91 52.53
PGSC0003DMT400022743 Potato plasma membrane 50.58 52.1
Solyc09g011990.1.1 Tomato plasma membrane 50.58 52.1
CDY21254 Canola plasma membrane 48.69 51.46
CDX91384 Canola plasma membrane 50.29 51.41
Bra005168.1-P Field mustard plasma membrane 50.29 51.41
Solyc09g012000.1.1 Tomato plasma membrane 49.56 50.97
AT3G53810.1 Thale cress plasma membrane 49.71 50.52
CDY65835 Canola plasma membrane 48.26 50.38
Bra035326.1-P Field mustard plasma membrane 48.84 50.07
CDY02414 Canola plasma membrane 42.15 49.15
AT4G02420.1 Thale cress plasma membrane 47.67 49.03
CDX90939 Canola plasma membrane 46.95 48.87
Bra018553.1-P Field mustard plasma membrane 47.24 48.73
AT4G02410.1 Thale cress plasma membrane 47.67 48.66
Bra000881.1-P Field mustard plasma membrane 47.38 48.3
CDY55369 Canola plasma membrane 46.95 48.21
HORVU2Hr1G014930.1 Barley plastid 52.03 48.18
Bra000880.1-P Field mustard plasma membrane 46.08 46.69
HORVU5Hr1G020530.1 Barley plasma membrane 44.77 43.44
HORVU5Hr1G114030.4 Barley plasma membrane 44.91 42.8
Solyc09g011060.2.1 Tomato plasma membrane 50.58 41.83
GSMUA_Achr9P09920_001 Banana plasma membrane 40.7 29.54
GSMUA_Achr9P10000_001 Banana cytosol 42.01 15.08
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20UniProt:A0A287SKK1InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
EnsemblPlantsGene:HORVU5Hr1G104840EnsemblPlants:HORVU5Hr1G104840.1InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domPFAM:PF00069
PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF28
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B468FB2SEG:seg::
Description
No Description!
Coordinates
chrchr5H:+:620162908..620165410
Molecular Weight (calculated)
75223.3 Da
IEP (calculated)
7.723
GRAVY (calculated)
-0.002
Length
688 amino acids
Sequence
(BLAST)
001: LGPIVRRKRA AHAHYHIMKL TVLFVVLFSF HLAAGDDVQV QFAFPGFAGA NLTVDGNATV TPDGLVVLNS RKTNLKGHAF YPTPLRFRGS PGGQVHSFAS
101: SFVFAIVSDY TDFSAHGMAL VVCPTPESLS SALPAGYLAL LNVQNNGNAS NHLFAVELDT TQNTDFKDIN SNHVGIDVND LHSLQSHPTG YYLDGSGDFR
201: NLTLFSREAM QVWVSYDGGT GQIDVTLAPL GVAKPARPLV SDTYNLSSVI TEQAYIGFSS STGGINTRHY VLGWSFAMNG PAPAIDIAKL PKLPRFGPKP
301: RSKVLEIVLP IATAAVVLAV CTVVALLLLR HLRYAQLLED WEIEFGPHRF SYKELYHATK GFKSKHLLGA GGFGKVYKGV LSRSKLEVAI KKISHESRQG
401: TREFIAEVVS IGRLRNPNLV QLLGYCRRKG ELLLVYEYMP NGSLDKYLYG ECEGVLDWAK RFHAIKGVAS GLLYIHERWE KVVIHRDIKA SNVLLDGEMN
501: GRLGDFGLAR LYDHGTDPHT THVVGTMGYL APELVRTGKA STLTDVFAFG AFLLEITCGR RPVSNGSPGM DTDSHEMLVD WVLDHFRRGC LAETVDARLG
601: GDCDVDEACR VLKLGLLCSH PFASTRPSMR QVMHYLDSDT PLPDLSLADM TSFSTMALLQ NQGFDSYAIS YPSSMGSIGT VSYISGGR
Best Arabidopsis Sequence Match ( AT4G29050.2 )
(BLAST)
001: MVRSFMRGKK NCKTMKFFVL VLLLVLQFFS NKALSQSEEG EFGFNGYLYD NSGIAITNSK GLMKLTNSSE FSYGHVFYNS PVRFKNSPNG TVSSFSTTFV
101: FAIVSNVNAL DGHGLAFVIS PTKGLPYSSS SQYLGLFNLT NNGDPSNHIV AVEFDTFQNQ EFDDMDNNHV GIDINSLSSE KASTAGYYED DDGTFKNIRL
201: INQKPIQAWI EYDSSRRQLN VTIHPIHLPK PKIPLLSLTK DLSPYLFDSM YVGFTSATGR LRSSHYILGW TFKLNGTASN IDISRLPKLP RDSRSTSVKK
301: ILAISLSLTS LAILVFLTIS YMLFLKRKKL MEVLEDWEVQ FGPHRFAYKD LYIATKGFRN SELLGKGGFG KVYKGTLSTS NMDIAVKKVS HDSRQGMREF
401: VAEIATIGRL RHPNLVRLLG YCRRKGELYL VYDCMPKGSL DKFLYHQPEQ SLDWSQRFKI IKDVASGLCY LHHQWVQVII HRDIKPANVL LDDSMNGKLG
501: DFGLAKLCEH GFDPQTSNVA GTFGYISPEL SRTGKASTSS DVFAFGILML EITCGRRPVL PRASSPSEMV LTDWVLDCWE DDILQVVDER VKQDDKYLEE
601: QVALVLKLGL FCSHPVAAVR PSMSSVIQFL DGVAQLPNNL FDIVKARENV GAIEGFGEAA ESLAEPCSVA TLTFTEPFVS HGR
Arabidopsis Description
Concanavalin A-like lectin protein kinase family protein [Source:TAIR;Acc:AT4G29050]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.