Factsheet for HORVU6Hr1G025340.4

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane
MultiLoc:	plasma membrane
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT4G02410.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT4G02410.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT4G02410.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT4G02410.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT4G02410.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT4G02410.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT4G02410.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT4G02410.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT4G02410.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT4G02410.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT4G02410.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT4G02410.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT4G02410.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT4G02410.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT4G02410.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT4G02410.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT4G02410.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT4G02410.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT4G02410.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT4G02410.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT4G02410.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT4G02410.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT4G02410.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G122100.1	Wheat	plasma membrane	85.25	89.4
TraesCS6B01G160500.1	Wheat	plasma membrane	84.97	88.97
TraesCS6A01G132400.1	Wheat	plasma membrane	86.1	88.46
EER97932	Sorghum	plasma membrane	75.14	76.87
HORVU3Hr1G018500.1	Barley	plasma membrane	58.43	61.36
HORVU6Hr1G053090.1	Barley	cytosol, plasma membrane	60.81	61.16
HORVU3Hr1G018610.1	Barley	plasma membrane	58.15	60.97
HORVU5Hr1G098640.1	Barley	plasma membrane	58.01	60.38
HORVU5Hr1G104850.2	Barley	vacuole	50.42	60.34
HORVU3Hr1G018690.1	Barley	plasma membrane	57.02	60.06
HORVU6Hr1G025350.1	Barley	plasma membrane	56.6	58.92
HORVU7Hr1G000530.1	Barley	plasma membrane	56.74	58.89
HORVU5Hr1G104840.1	Barley	plasma membrane	56.88	58.87
HORVU6Hr1G053120.1	Barley	plasma membrane	54.92	58.53
HORVU2Hr1G091360.1	Barley	plasma membrane	53.93	56.8
HORVU1Hr1G009250.16	Barley	plasma membrane	55.48	56.59
HORVU7Hr1G028730.4	Barley	plasma membrane	54.49	56.4
HORVU1Hr1G037000.1	Barley	plasma membrane	52.25	55.94
HORVU7Hr1G019400.2	Barley	plasma membrane	52.39	55.42
HORVU7Hr1G000830.1	Barley	plasma membrane	53.79	55.03
HORVU2Hr1G037210.1	Barley	plasma membrane	52.25	54.79
HORVU2Hr1G037200.1	Barley	plasma membrane	52.11	53.69
KRH49145	Soybean	plasma membrane	50.0	53.37
AT2G37710.1	Thale cress	plasma membrane	50.28	53.04
KRH00016	Soybean	plasma membrane	49.44	52.77
CDX91325	Canola	cytosol, mitochondrion	19.52	52.65
Bra005168.1-P	Field mustard	plasma membrane	49.72	52.6
HORVU2Hr1G120660.8	Barley	plasma membrane	51.12	52.53
CDX91384	Canola	plasma membrane	49.58	52.45
PGSC0003DMT400022983	Potato	plasma membrane	48.74	52.18
HORVU7Hr1G019390.1	Barley	plasma membrane	51.4	51.84
VIT_08s0007g00810.t01	Wine grape	plasma membrane	49.44	51.76
CDY65835	Canola	plasma membrane	47.75	51.59
CDY21254	Canola	plasma membrane	47.05	51.46
AT3G53810.1	Thale cress	plasma membrane	48.74	51.26
PGSC0003DMT400052365	Potato	plasma membrane	47.47	50.75
Solyc09g011990.1.1	Tomato	plasma membrane	47.19	50.3
Solyc09g012000.1.1	Tomato	plasma membrane	47.05	50.07
Bra035326.1-P	Field mustard	plasma membrane	47.05	49.93
CDY02414	Canola	plasma membrane	40.87	49.32
PGSC0003DMT400022743	Potato	plasma membrane	46.07	49.1
Bra000881.1-P	Field mustard	plasma membrane	46.49	49.04
HORVU2Hr1G014930.1	Barley	plastid	50.98	48.86
Bra018553.1-P	Field mustard	plasma membrane	45.51	48.58
AT4G02410.1	Thale cress	plasma membrane	45.93	48.52
AT4G02420.1	Thale cress	plasma membrane	45.51	48.43
CDX90939	Canola	plasma membrane	44.94	48.41
CDY55369	Canola	plasma membrane	44.94	47.76
Bra000880.1-P	Field mustard	plasma membrane	43.68	45.8
HORVU5Hr1G114030.4	Barley	plasma membrane	44.52	43.91
HORVU5Hr1G020530.1	Barley	plasma membrane	43.26	43.44
Solyc09g011060.2.1	Tomato	plasma membrane	46.07	39.42
GSMUA_Achr9P09920_001	Banana	plasma membrane	37.78	28.38
GSMUA_Achr9P10000_001	Banana	cytosol	38.06	14.14

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	UniProt:A0A287TMD4	ncoils:Coil
InterPro:ConA-like_dom_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0030246	EnsemblPlantsGene:HORVU6Hr1G025340	EnsemblPlants:HORVU6Hr1G025340.4	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom
PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007
PANTHER:PTHR27007:SF28	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000B4649DE	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:+:91923275..91926226

Molecular Weight (calculated)

77879.3 Da

IEP (calculated)

6.433

GRAVY (calculated)

-0.046

Length

712 amino acids

Sequence
(BLAST)

001: MYATTSAWLD RETRSEVTTM SANKLALILV VGLLINLVAR TAGDDGHQFV YSGFAGSSFL LDGAASVTGS GLLELTNGTL RLKGHAIYRT PLRLRGRSFS
101: SSFVFGILSA YPDVSANGIA LFVAPTTNLS GAMAAQYIGL LNSSNNGNAT NHVFAVELDT MQNNEFRDLS DNHVGIDVNS LVSVNSTDAG YYPDDGNGEF
201: RNLTLISHEA MQVWVDYEGG TGRINVTLAP LNLKTGSRPA RPLLSVVHDL SAVIPDTAYI GFSSSTGLVS SRHYILGWSF AVGGPAPAID VARLPKLPRD
301: FQKPRSKAME VILPIATAAL VLLTGTALVL LRRRQLRYSE LREDWEVEFG PHRFSYKDLF RATEGFKNKN LLGVGGFGKV YRGALPASKC QIAVKRVSHS
401: SKQGMKEFVA EIVSIGRMQH PNLVQLLGYC RRKGELLLVY EYMSNGSLDK YLHPQPQDGD KQNGATLNWA HRLGIIKGIA SGLIYLHEEW EKVVVHRDIK
501: ASNVLLDAGM NGRLGDFGLA MLYDHTADPE TSHVVGTIGY LAPEIGRTSK ATILTDVFAF GIFVLEVICG KKPIMQDSKD DQLMLADWVV GHWSRGSLVE
601: AVDTRLQGEY DDDEACVVLK VGLLCSHPFP EARPAMRQVL QYLNGDMPVP ELVPAHLSLQ MLAFMQNEGF DSYIMSYPSS VESVNSFTSL VQQRHGEGIS
701: PDDEFVPEEG IR

Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)

001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR

Arabidopsis Description

LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.