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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
TargetP:secretory
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT4G02410.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
AT4G02410.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G018500.1 Barley plasma membrane 99.12 99.26
TraesCS3B01G119200.1 Wheat plasma membrane 55.52 92.63
TraesCS3D01G104100.1 Wheat plasma membrane 91.16 92.25
TraesCS3A01G101700.1 Wheat plasma membrane 90.87 91.54
TraesCS3B01G119600.1 Wheat plasma membrane 90.57 91.52
Os07t0283125-00 Rice plasma membrane 73.34 74.44
EER98367 Sorghum plasma membrane 73.34 74.22
Zm00001d019411_P001 Maize plasma membrane 71.72 71.3
HORVU5Hr1G104850.2 Barley vacuole 54.79 62.52
HORVU6Hr1G053120.1 Barley plasma membrane 60.82 61.83
HORVU5Hr1G104840.1 Barley plasma membrane 61.41 60.61
HORVU2Hr1G091360.1 Barley plasma membrane 59.65 59.91
HORVU3Hr1G018690.1 Barley plasma membrane 59.06 59.32
HORVU5Hr1G098640.1 Barley plasma membrane 59.65 59.21
HORVU6Hr1G053090.1 Barley cytosol, plasma membrane 61.56 59.04
HORVU6Hr1G025340.4 Barley plasma membrane 60.97 58.15
HORVU1Hr1G037000.1 Barley plasma membrane 55.96 57.14
HORVU6Hr1G025350.1 Barley plasma membrane 57.29 56.87
HORVU2Hr1G037210.1 Barley plasma membrane 56.85 56.85
HORVU7Hr1G028730.4 Barley plasma membrane 57.44 56.69
HORVU7Hr1G000530.1 Barley plasma membrane 57.14 56.56
HORVU1Hr1G009250.16 Barley plasma membrane 58.03 56.45
HORVU7Hr1G019390.1 Barley plasma membrane 58.32 56.09
HORVU7Hr1G019400.2 Barley plasma membrane 55.38 55.87
HORVU2Hr1G037200.1 Barley plasma membrane 56.55 55.57
HORVU2Hr1G120660.8 Barley plasma membrane 54.79 53.68
HORVU7Hr1G000830.1 Barley plasma membrane 54.93 53.59
KRH49145 Soybean plasma membrane 52.58 53.52
CDX91325 Canola cytosol, mitochondrion 20.77 53.41
KRH00016 Soybean plasma membrane 52.43 53.37
AT2G37710.1 Thale cress plasma membrane 51.69 52.0
HORVU2Hr1G014930.1 Barley plastid 56.85 51.95
CDY65835 Canola plasma membrane 50.37 51.9
VIT_08s0007g00810.t01 Wine grape plasma membrane 51.84 51.76
AT3G53810.1 Thale cress plasma membrane 51.25 51.4
PGSC0003DMT400052365 Potato plasma membrane 50.22 51.2
Solyc09g011990.1.1 Tomato plasma membrane 50.07 50.9
PGSC0003DMT400022983 Potato plasma membrane 49.78 50.83
CDX91384 Canola plasma membrane 50.37 50.82
Bra005168.1-P Field mustard plasma membrane 50.22 50.67
CDY21254 Canola plasma membrane 48.45 50.54
PGSC0003DMT400022743 Potato plasma membrane 48.6 49.4
Bra035326.1-P Field mustard plasma membrane 48.75 49.33
CDY02414 Canola plasma membrane 42.71 49.15
Solyc09g012000.1.1 Tomato plasma membrane 48.16 48.88
AT4G02410.1 Thale cress plasma membrane 48.01 48.37
CDY55369 Canola plasma membrane 47.72 48.36
AT4G02420.1 Thale cress plasma membrane 47.57 48.28
Bra018553.1-P Field mustard plasma membrane 47.42 48.28
Bra000881.1-P Field mustard plasma membrane 47.86 48.15
CDX90939 Canola plasma membrane 46.83 48.11
HORVU5Hr1G114030.4 Barley plasma membrane 47.42 44.6
Bra000880.1-P Field mustard plasma membrane 44.33 44.33
HORVU5Hr1G020530.1 Barley plasma membrane 45.51 43.58
Solyc09g011060.2.1 Tomato plasma membrane 48.6 39.66
GSMUA_Achr9P09920_001 Banana plasma membrane 39.03 27.95
GSMUA_Achr9P10000_001 Banana cytosol 42.27 14.97
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20UniProt:A0A287KB76InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
EnsemblPlantsGene:HORVU3Hr1G018610EnsemblPlants:HORVU3Hr1G018610.1InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domPFAM:PF00069
PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF25
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B482BBDSEG:seg::
Description
No Description!
Coordinates
chrchr3H:-:48628066..48631786
Molecular Weight (calculated)
74216.8 Da
IEP (calculated)
6.602
GRAVY (calculated)
-0.012
Length
679 amino acids
Sequence
(BLAST)
001: TMESAFKLVR LLFLVCLTLA ASAAGDGDDQ LVYSGFTGAN LTLDGAATVT SDGLLELTNG TDQQKGHAFY PTPLRFAGGS PGGGGVRSFS ASFVFAIQSV
101: YTDLSAHGMA FVVASSNNFS SALPGQLLGL TDVQNNGNGS NHFFAVELDT IQNKEFGDLN ANHAGANVNG LRSLQSYYAG YYDDGDGSFR NLSLISREAM
201: QVWVDYDHRI AQITVTMAPL NVRRPVRPLF RATYNLTTAV TDVAYVGFSS ATGTINVRHY VLGWSFAMNG PAPAIDIARL PRLPRMGPKP RSKVLDIVLP
301: IASGAFVLAL GAIVLLVLRR RFRYAELRED WEVEFGPRRF SYKDLHRATE GFSDTQLLGI GGFGRVYSGI LPASRVEVAV KKVAHDSKQG IKEFISEVVS
401: IGRLQHRNLA PLLGYCRRRG ELFLVYEHMP NGSVDKYLHG REGKPILNWA QRWHIVKGIA SCLVYLHEEW EKVVVHRDIK ASNVLLDSDM NGRLGDFGLA
501: RLYDHDADPQ TTHVVGTIGY LAPELGHTSK ATPLTDVFAF GVFVLEVACG QRPVNPNLED GQVLLVESVL EQWTKGSLLD AVDKQLGGNY NANEACVALK
601: LGLLCSHPFA NARPTMRQVT QYLDGDMPLP EMSPTDLSFQ MMTIMQNEGF DQFIMTYPSS TASIDSTSVL TVGSVMCIY
Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.