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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
TargetP:secretory
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT4G02410.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
AT4G02410.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G028730.4 Barley plasma membrane 81.9 82.85
OQU76295 Sorghum cytosol, nucleus, plastid 60.49 74.25
OQU78436 Sorghum cytosol 60.78 73.31
Zm00001d037398_P001 Maize plasma membrane 71.41 73.2
HORVU3Hr1G018690.1 Barley plasma membrane 58.91 60.65
HORVU6Hr1G053120.1 Barley plasma membrane 56.75 59.13
HORVU5Hr1G104840.1 Barley plasma membrane 58.05 58.72
HORVU5Hr1G098640.1 Barley plasma membrane 57.04 58.04
HORVU6Hr1G025350.1 Barley plasma membrane 56.32 57.31
HORVU5Hr1G104850.2 Barley vacuole 48.71 56.97
HORVU7Hr1G000530.1 Barley plasma membrane 55.32 56.12
HORVU1Hr1G009250.16 Barley plasma membrane 56.03 55.87
HORVU6Hr1G053090.1 Barley cytosol, plasma membrane 56.61 55.65
HORVU7Hr1G019400.2 Barley plasma membrane 53.45 55.27
HORVU3Hr1G018500.1 Barley plasma membrane 53.59 55.01
HORVU3Hr1G018610.1 Barley plasma membrane 53.59 54.93
HORVU6Hr1G025340.4 Barley plasma membrane 55.03 53.79
HORVU2Hr1G037210.1 Barley plasma membrane 52.3 53.61
HORVU2Hr1G037200.1 Barley plasma membrane 53.16 53.55
HORVU1Hr1G037000.1 Barley plasma membrane 50.86 53.23
HORVU2Hr1G091360.1 Barley plasma membrane 51.15 52.66
HORVU2Hr1G120660.8 Barley plasma membrane 52.16 52.38
KRH49145 Soybean plasma membrane 50.14 52.32
KRH00016 Soybean plasma membrane 50.14 52.32
Bra005168.1-P Field mustard plasma membrane 50.43 52.15
PGSC0003DMT400022983 Potato plasma membrane 49.71 52.03
CDX91384 Canola plasma membrane 50.29 52.01
AT2G37710.1 Thale cress plasma membrane 50.43 52.0
PGSC0003DMT400052365 Potato plasma membrane 49.71 51.95
Solyc09g011990.1.1 Tomato plasma membrane 49.28 51.35
VIT_08s0007g00810.t01 Wine grape plasma membrane 50.14 51.32
CDY21254 Canola plasma membrane 47.84 51.15
CDX91325 Canola cytosol, mitochondrion 19.4 51.14
HORVU7Hr1G019390.1 Barley plasma membrane 51.15 50.42
Solyc09g012000.1.1 Tomato plasma membrane 48.42 50.37
Bra035326.1-P Field mustard plasma membrane 48.42 50.22
AT3G53810.1 Thale cress plasma membrane 48.85 50.22
PGSC0003DMT400022743 Potato plasma membrane 47.99 50.0
CDY65835 Canola plasma membrane 47.13 49.77
AT4G02410.1 Thale cress plasma membrane 47.84 49.41
Bra000881.1-P Field mustard plasma membrane 47.56 49.04
Bra018553.1-P Field mustard plasma membrane 46.98 49.03
CDX90939 Canola plasma membrane 46.55 49.02
AT4G02420.1 Thale cress plasma membrane 46.84 48.73
CDY02414 Canola plasma membrane 41.09 48.47
CDY55369 Canola plasma membrane 45.69 47.46
HORVU2Hr1G014930.1 Barley plastid 50.0 46.84
Bra000880.1-P Field mustard plasma membrane 45.11 46.24
HORVU5Hr1G020530.1 Barley plasma membrane 44.11 43.3
HORVU5Hr1G114030.4 Barley plasma membrane 43.68 42.11
Solyc09g011060.2.1 Tomato plasma membrane 47.84 40.02
GSMUA_Achr9P09920_001 Banana plasma membrane 38.79 28.48
GSMUA_Achr9P10000_001 Banana cytosol 40.23 14.61
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20UniProt:A0A287VBZ4InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
EnsemblPlantsGene:HORVU7Hr1G000830EnsemblPlants:HORVU7Hr1G000830.1InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domPFAM:PF00069
PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF14
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B47DEC1SEG:seg::
Description
No Description!
Coordinates
chrchr7H:+:1767722..1769809
Molecular Weight (calculated)
76004.1 Da
IEP (calculated)
6.658
GRAVY (calculated)
-0.174
Length
696 amino acids
Sequence
(BLAST)
001: MEHPPTLRFS LQLQIFLSFV LSLAFLTTTT TTITQGQEEE EDQFVYSGFS GGGGTGLGLT LDGTATVTPD GVLKLTNGTL HLKGHAFYPT PCRFRKSPNG
101: AVQSFSVTFV FCMVPVYSDQ CTDGMTFLIS PTKDFSGAQH SQYLGLLNKT TDGKPSNQIF AVELDSSQNT EFDDIDDNHV GIDINSLTST QVRPAGFYDD
201: KKGGAFNNLT LVSRKEMQVW VDYDADTTKI TVTLAPLKVA KPSRPLVSTT YNLSTVLRDK SYLGFSASTG PINSLYCVLG WSLGINRAAP DIDMTKLPKL
301: PRIGPKPRPK AMEIVLPIAS ATFIFLVGTS IVLLVRRRRK YAELHEDWED EYGPHRFSYK DLFHATQGFH NKNLLGHGGF GKVYKGVLPV SKLEVAVKRV
401: SHESKQGIKE FIAEIVSIGR IRHRNIVQLL GYCRRKGELL LVYEYMSNGS LDRYLYVQEE EDAPTLDWGR RFEIIKGVAS GLFYLHERWE KVVVHRDIKA
501: SNVLVDGEMN GRLGDFGLSR LYEHGTDPQT TRVVGTMGYF APELARTGKA TPLTDVYAFG IFILEVTCGR RPIVDKGVEE DDGSEILVDW VVEHCRKGSL
601: METVDMRLRG SSSDPDEVCL ALKIGLLCAH PFGNVRPSMR QVMKYLDGET PVPELMPTTL SYSMMGVLQN DGFSDYASLS ATVSSXXXXX XXXXXX
Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.