Factsheet for HORVU6Hr1G025350.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 8
golgi 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, extracellular, nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT4G02410.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT4G02410.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT4G02410.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT4G02410.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT4G02410.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT4G02410.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT4G02410.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT4G02410.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT4G02410.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT4G02410.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT4G02410.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT4G02410.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT4G02410.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT4G02410.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT4G02410.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT4G02410.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT4G02410.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT4G02410.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT4G02410.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT4G02410.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT4G02410.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT4G02410.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT4G02410.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G122200.1	Wheat	plasma membrane	92.69	92.29
TraesCS6B01G160600.1	Wheat	plasma membrane	92.11	91.84
TraesCS6A01G132300.1	Wheat	plasma membrane	90.5	90.36
KXG34333	Sorghum	plasma membrane	72.81	69.46
HORVU6Hr1G053120.1	Barley	plasma membrane	59.8	61.23
HORVU7Hr1G000530.1	Barley	plasma membrane	60.82	60.64
HORVU3Hr1G018690.1	Barley	plasma membrane	58.48	59.17
HORVU5Hr1G104840.1	Barley	plasma membrane	59.5	59.16
HORVU7Hr1G028730.4	Barley	plasma membrane	58.77	58.43
CDX91325	Canola	cytosol, mitochondrion	22.51	58.33
HORVU5Hr1G098640.1	Barley	plasma membrane	58.19	58.19
HORVU3Hr1G018500.1	Barley	plasma membrane	57.02	57.52
HORVU3Hr1G018610.1	Barley	plasma membrane	56.87	57.29
HORVU2Hr1G037210.1	Barley	plasma membrane	56.87	57.29
HORVU2Hr1G091360.1	Barley	plasma membrane	56.58	57.25
HORVU1Hr1G037000.1	Barley	plasma membrane	55.56	57.14
HORVU6Hr1G053090.1	Barley	cytosol, plasma membrane	58.63	56.64
HORVU6Hr1G025340.4	Barley	plasma membrane	58.92	56.6
HORVU5Hr1G104850.2	Barley	vacuole	49.12	56.47
HORVU7Hr1G000830.1	Barley	plasma membrane	57.31	56.32
HORVU1Hr1G009250.16	Barley	plasma membrane	56.73	55.59
HORVU7Hr1G019390.1	Barley	plasma membrane	57.02	55.24
HORVU7Hr1G019400.2	Barley	plasma membrane	53.22	54.09
HORVU2Hr1G120660.8	Barley	plasma membrane	54.24	53.54
VIT_08s0007g00810.t01	Wine grape	plasma membrane	53.07	53.38
HORVU2Hr1G037200.1	Barley	plasma membrane	53.8	53.26
PGSC0003DMT400022983	Potato	plasma membrane	51.61	53.08
KRH49145	Soybean	plasma membrane	51.75	53.07
PGSC0003DMT400022743	Potato	plasma membrane	51.75	52.99
KRH00016	Soybean	plasma membrane	51.61	52.92
PGSC0003DMT400052365	Potato	plasma membrane	51.32	52.7
AT2G37710.1	Thale cress	plasma membrane	51.17	51.85
Solyc09g011990.1.1	Tomato	plasma membrane	50.58	51.8
CDY21254	Canola	plasma membrane	49.27	51.77
Solyc09g012000.1.1	Tomato	plasma membrane	50.29	51.42
AT4G02420.1	Thale cress	plasma membrane	50.0	51.12
CDY55369	Canola	plasma membrane	50.0	51.04
CDX91384	Canola	plasma membrane	50.0	50.82
Bra005168.1-P	Field mustard	plasma membrane	49.85	50.67
CDY65835	Canola	plasma membrane	48.54	50.38
AT3G53810.1	Thale cress	plasma membrane	49.85	50.37
Bra018553.1-P	Field mustard	plasma membrane	48.83	50.08
Bra035326.1-P	Field mustard	plasma membrane	49.12	50.07
AT4G02410.1	Thale cress	plasma membrane	48.98	49.7
CDX90939	Canola	plasma membrane	47.37	49.02
CDY02414	Canola	plasma membrane	42.11	48.81
Bra000881.1-P	Field mustard	plasma membrane	48.1	48.74
HORVU2Hr1G014930.1	Barley	plastid	52.05	47.91
Bra000880.1-P	Field mustard	plasma membrane	46.2	46.54
HORVU5Hr1G114030.4	Barley	plasma membrane	45.76	43.35
HORVU5Hr1G020530.1	Barley	plasma membrane	44.59	43.02
Solyc09g011060.2.1	Tomato	plasma membrane	51.02	41.95
GSMUA_Achr9P09920_001	Banana	plasma membrane	41.37	29.85
GSMUA_Achr9P10000_001	Banana	cytosol	41.67	14.87

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	EMBL:AK360292	EMBL:AK365453
InterPro:ConA-like_dom_sf	UniProt:F2D8T0	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0030246	EnsemblPlantsGene:HORVU6Hr1G025350	EnsemblPlants:HORVU6Hr1G025350.1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:Legume_lectin_dom	PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27007	PANTHER:PTHR27007:SF134	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000200599D	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D8T0]

Coordinates

chrchr6H:+:91936048..91938968

Molecular Weight (calculated)

74746.3 Da

IEP (calculated)

7.407

GRAVY (calculated)

-0.004

Length

684 amino acids

Sequence
(BLAST)

001: MAMMHMFFLL ILFLSAGVIL PLPPVVAAAD ADGEQFVYTG FTGSNLVLDG AATITATGLV ELTNATTHQK GHAFHPAPLR LRGSPDGTGT VRSFSVAFVC
101: GIVSSYTDFS THGLALVIAP GVRSLSAGLT DQYFGVTNAQ NDGSAANHLF AVELDTVQNI EFRDINNNHV GVDINGLTSV VSHEAGYYDD RNGGGFQNVS
201: LISRAAMQFW VDYDRVTTQI DVTMAPLWMA RPSKPLLSTT QNLSTVLAVE PSYIGFSSST GPVNTRHYVL GWSLGIDGPA PAIDAAKLPK LPQLGPKPRS
301: RVLEITLPIA SAVVVLAVGI ALVLLVRRRL RYTEVREDWE MEFGPHRFAY KDLFQATKGF KDKHLLGAGG FGMVYKGVLP ASGVEIAVKK VSHGSKQGVK
401: EFVAEIVSIG RIKHRNLVQL LGYCRRKDEL ILVYDYMPNG SLDKYLYGHG DGDGMTLDWA QRLHVIKGVA CGLHYLHERW EKVVIHRDVK TSNVLLDKEM
501: NGRLGDFGLA KLYEHGTNPQ TTRVVGTTGY LAPELVRTGK ATPLTDAFAF GTFMLEVACG RRPIKQDKQG NQILLADWVL DHLHRESLIE AADPRLQHEY
601: NSDEVCLILK IGLLCSHPSP SARPMMQQVL QYLDGELPLP EMTRTTLSFN LLALKERKEL QSMSSPFSST AMTVGTISDL SGGR

Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)

001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR

Arabidopsis Description

LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.