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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT4G02410.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
AT4G02410.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G139900.1 Wheat vacuole 59.74 89.54
HORVU7Hr1G000830.1 Barley plasma membrane 82.85 81.9
OQU76295 Sorghum cytosol, nucleus, plastid 64.97 78.84
OQU78436 Sorghum cytosol 65.41 77.99
Zm00001d037398_P001 Maize plasma membrane 75.29 76.29
HORVU3Hr1G018690.1 Barley plasma membrane 61.05 62.13
HORVU5Hr1G098640.1 Barley plasma membrane 59.74 60.09
HORVU6Hr1G053120.1 Barley plasma membrane 57.56 59.28
HORVU5Hr1G104840.1 Barley plasma membrane 59.16 59.16
HORVU6Hr1G025350.1 Barley plasma membrane 58.43 58.77
HORVU7Hr1G000530.1 Barley plasma membrane 58.14 58.31
HORVU3Hr1G018500.1 Barley plasma membrane 56.83 57.67
HORVU5Hr1G104850.2 Barley vacuole 49.85 57.65
HORVU1Hr1G009250.16 Barley plasma membrane 58.43 57.59
HORVU3Hr1G018610.1 Barley plasma membrane 56.69 57.44
HORVU7Hr1G019400.2 Barley plasma membrane 55.23 56.46
HORVU2Hr1G037210.1 Barley plasma membrane 55.38 56.11
CDX91325 Canola cytosol, mitochondrion 21.51 56.06
HORVU2Hr1G037200.1 Barley plasma membrane 56.1 55.86
HORVU6Hr1G053090.1 Barley cytosol, plasma membrane 57.27 55.65
HORVU2Hr1G091360.1 Barley plasma membrane 54.07 55.03
HORVU1Hr1G037000.1 Barley plasma membrane 52.76 54.59
HORVU6Hr1G025340.4 Barley plasma membrane 56.4 54.49
KRH49145 Soybean plasma membrane 52.47 54.12
KRH00016 Soybean plasma membrane 52.33 53.97
HORVU2Hr1G120660.8 Barley plasma membrane 54.36 53.97
PGSC0003DMT400022983 Potato plasma membrane 51.6 53.38
VIT_08s0007g00810.t01 Wine grape plasma membrane 52.76 53.38
PGSC0003DMT400052365 Potato plasma membrane 51.45 53.15
HORVU7Hr1G019390.1 Barley plasma membrane 54.36 52.97
CDX91384 Canola plasma membrane 51.6 52.75
AT2G37710.1 Thale cress plasma membrane 51.45 52.44
Bra005168.1-P Field mustard plasma membrane 51.16 52.3
AT3G53810.1 Thale cress plasma membrane 50.87 51.7
CDY21254 Canola plasma membrane 48.84 51.61
Solyc09g011990.1.1 Tomato plasma membrane 50.0 51.5
PGSC0003DMT400022743 Potato plasma membrane 49.42 50.9
Bra035326.1-P Field mustard plasma membrane 49.42 50.67
CDY65835 Canola plasma membrane 48.4 50.53
AT4G02410.1 Thale cress plasma membrane 49.42 50.45
Bra018553.1-P Field mustard plasma membrane 48.69 50.22
AT4G02420.1 Thale cress plasma membrane 48.69 50.07
Solyc09g012000.1.1 Tomato plasma membrane 48.69 50.07
CDX90939 Canola plasma membrane 47.82 49.77
Bra000881.1-P Field mustard plasma membrane 48.69 49.63
CDY02414 Canola plasma membrane 42.15 49.15
CDY55369 Canola plasma membrane 47.67 48.96
HORVU2Hr1G014930.1 Barley plastid 52.03 48.18
Bra000880.1-P Field mustard plasma membrane 46.95 47.57
HORVU5Hr1G114030.4 Barley plasma membrane 45.06 42.94
HORVU5Hr1G020530.1 Barley plasma membrane 43.9 42.6
Solyc09g011060.2.1 Tomato plasma membrane 48.55 40.14
GSMUA_Achr9P09920_001 Banana plasma membrane 40.55 29.43
GSMUA_Achr9P10000_001 Banana cytosol 41.57 14.92
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20InterPro:ConA-like_dom_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538GO:GO:0030246EnsemblPlantsGene:HORVU7Hr1G028730EnsemblPlants:HORVU7Hr1G028730.4InterPro:IPR000719InterPro:Kinase-like_dom_sf
InterPro:Legume_lectin_domUniProt:M0VVC5PFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF14InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002956D49
SEG:seg:::::
Description
No Description!
Coordinates
chrchr7H:-:53033203..53036745
Molecular Weight (calculated)
76344.3 Da
IEP (calculated)
5.935
GRAVY (calculated)
-0.105
Length
688 amino acids
Sequence
(BLAST)
001: MEHQSTLGFS LQLHILLSLA LSLASFTTVT ATSEEEGQFV YSGFSGSTDL TLDGTATVTP DGVLKLTNGT VHLKGHAFYP TPWQFSKSPN GVVQSFSIIF
101: VFGMVPVYSD QCTDGMTFFI SPTKDFSGAQ TSQYLGLLNI TNDGKSSNHI FAVELDSSQN TEFKDIDDNH VGININSLTS TEARPAGFYD DKNNGVFNSL
201: SLVSRKEMQV WVDYDGDTTQ INVTLAPLKV AKPLMPLVST TKNLSTVLQD QSYVGFSAST GPIDSLYCVL GWSLGINRPA PDIDITKLPK LPRIGPKPQS
301: KVLEIVLPIA TAIFIFLVGT TIILLVRRRM RYAELHEDWE DEYGPHRFSY KDLFHATQGF HDANLLGRGG FGKVYKGVLP VSKLEVAVKR VSHESKQGIK
401: EFIAEIVSIG RIRHRNIVQL LGYCRRKGEL LLVYDYMSNG SLDKYLYLQE EEEHKPTLDW ARRFEIIKGV ASGLFYLHER WEKVVIHRDI KASNVLLDSE
501: MNGRLGDFGL SRLYDHGTDP QTTRVVGTMG YFAPELARTG KATPLTDVYA FGIFILEVTC GRRPIIDSNQ AEEVGSDILI DWVVEHWSKG SLADTLDMRL
601: QGSNCNLDEV CLALKLGLLC AHPFGNVRPS MRQVMQYLDG EMLLPELMPT NVSYSMMAVM QNDGFSQYTS LTDTVSSNGV TSSLSTGR
Best Arabidopsis Sequence Match ( AT4G02410.1 )
(BLAST)
001: MFFKLFTIFF FFIILLSKPL NSSSQSLNFT YNSFHRPPTN ISIQGIATVT SNGILKLTDK TVISTGHAFY TEPIRFKDSP NDTVSSFSTT FVIGIYSGIP
101: TISGHGMAFF IAPNPVLSSA MASQYLGLFS STNNGNDTNH ILAVEFDTIM NPEFDDTNDN HVGININSLT SVKSSLVGYW DEINQFNNLT LISRKRMQVW
201: VDYDDRTNQI DVTMAPFGEV KPRKALVSVV RDLSSVFLQD MYLGFSAATG YVLSEHFVFG WSFMVKGKTA PPLTLSKVPK FPRVGPTSLQ RFYKNRMPLF
301: SLLLIPVLFV VSLIFLVRFI VRRRRKFAEE FEDWETEFGK NRLRFKDLYY ATKGFKDKDL LGSGGFGRVY RGVMPTTKKE IAVKRVSNES RQGLKEFVAE
401: IVSIGRMSHR NLVPLLGYCR RRDELLLVYD YMPNGSLDKY LYDCPEVTLD WKQRFNVIIG VASGLFYLHE EWEQVVIHRD IKASNVLLDA EYNGRLGDFG
501: LARLCDHGSD PQTTRVVGTW GYLAPDHVRT GRATTATDVF AFGVLLLEVA CGRRPIEIEI ESDESVLLVD SVFGFWIEGN ILDATDPNLG SVYDQREVET
601: VLKLGLLCSH SDPQVRPTMR QVLQYLRGDA TLPDLSPLDF RGSGKMLGMN HRFSESCTFS SGSSIAYSIV SGGR
Arabidopsis Description
LECRK43L-type lectin-domain containing receptor kinase IV.3 [Source:UniProtKB/Swiss-Prot;Acc:O81292]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.