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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT4G02410.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
AT4G02410.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT4G02410.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT4G02410.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT4G02410.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT4G02410.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT4G02410.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G191500.1 Wheat plasma membrane 95.36 94.93
OQU76282 Sorghum plasma membrane 69.76 73.39
HORVU3Hr1G018500.1 Barley plasma membrane 61.98 61.06
HORVU3Hr1G018610.1 Barley plasma membrane 61.83 60.82
HORVU3Hr1G018690.1 Barley plasma membrane 61.53 60.8
HORVU5Hr1G098640.1 Barley plasma membrane 61.68 60.23
HORVU5Hr1G104840.1 Barley plasma membrane 61.68 59.88
HORVU6Hr1G025350.1 Barley plasma membrane 61.23 59.8
HORVU5Hr1G104850.2 Barley vacuole 52.84 59.33
HORVU7Hr1G000530.1 Barley plasma membrane 59.58 58.02
HORVU7Hr1G028730.4 Barley plasma membrane 59.28 57.56
HORVU6Hr1G053090.1 Barley cytosol, plasma membrane 60.93 57.49
HORVU7Hr1G019400.2 Barley plasma membrane 57.19 56.76
HORVU7Hr1G000830.1 Barley plasma membrane 59.13 56.75
HORVU1Hr1G037000.1 Barley plasma membrane 56.44 56.69
HORVU2Hr1G091360.1 Barley plasma membrane 57.04 56.36
HORVU1Hr1G009250.16 Barley plasma membrane 58.23 55.73
HORVU2Hr1G037210.1 Barley plasma membrane 55.84 54.93
HORVU6Hr1G025340.4 Barley plasma membrane 58.53 54.92
CDX91325 Canola cytosol, mitochondrion 21.11 53.41
HORVU2Hr1G037200.1 Barley plasma membrane 55.09 53.26
Bra005168.1-P Field mustard plasma membrane 52.54 52.15
AT3G53810.1 Thale cress plasma membrane 52.84 52.14
HORVU7Hr1G019390.1 Barley plasma membrane 55.09 52.12
HORVU2Hr1G120660.8 Barley plasma membrane 54.04 52.09
PGSC0003DMT400022983 Potato plasma membrane 51.8 52.03
KRH49145 Soybean plasma membrane 51.8 51.87
KRH00016 Soybean plasma membrane 51.8 51.87
AT2G37710.1 Thale cress plasma membrane 52.4 51.85
VIT_08s0007g00810.t01 Wine grape plasma membrane 52.69 51.76
CDX91384 Canola plasma membrane 52.1 51.71
PGSC0003DMT400052365 Potato plasma membrane 51.05 51.2
CDY65835 Canola plasma membrane 50.15 50.83
Solyc09g011990.1.1 Tomato plasma membrane 50.75 50.75
CDY21254 Canola plasma membrane 49.4 50.69
Solyc09g012000.1.1 Tomato plasma membrane 50.15 50.07
PGSC0003DMT400022743 Potato plasma membrane 49.7 49.7
Bra018553.1-P Field mustard plasma membrane 49.4 49.48
AT4G02410.1 Thale cress plasma membrane 49.85 49.41
AT4G02420.1 Thale cress plasma membrane 49.4 49.33
Bra035326.1-P Field mustard plasma membrane 49.4 49.18
CDY02414 Canola plasma membrane 43.11 48.81
CDX90939 Canola plasma membrane 48.2 48.71
CDY55369 Canola plasma membrane 48.65 48.51
Bra000881.1-P Field mustard plasma membrane 48.65 48.15
HORVU2Hr1G014930.1 Barley plastid 52.1 46.84
Bra000880.1-P Field mustard plasma membrane 46.41 45.66
HORVU5Hr1G020530.1 Barley plasma membrane 47.16 44.43
HORVU5Hr1G114030.4 Barley plasma membrane 47.6 44.04
Solyc09g011060.2.1 Tomato plasma membrane 49.4 39.66
GSMUA_Achr9P09920_001 Banana plasma membrane 41.17 29.01
GSMUA_Achr9P10000_001 Banana cytosol 42.52 14.81
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20UniProt:A0A287U6Q9InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
EnsemblPlantsGene:HORVU6Hr1G053120EnsemblPlants:HORVU6Hr1G053120.1InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domPFAM:PF00069
PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF28
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B484955:::
Description
No Description!
Coordinates
chrchr6H:-:328938304..328940712
Molecular Weight (calculated)
73726.0 Da
IEP (calculated)
8.130
GRAVY (calculated)
-0.024
Length
668 amino acids
Sequence
(BLAST)
001: MSSLVLLLTI PLGLNLAALI TTANDQFIYS GFSGSNLAVD DTATVTPDGL LELTNGTAYQ KGHAFHPAPF RLRDSTASGN GKVRSFSVAF VFGIVSVYPD
101: FSAHGMAFVM APRRNFSDAL PAKYLGLTNV HNDGNASNNI FAVELDTIQS VEFKDINANH VGIDINGLQS LRSYNAGYYD DKSGEFRSMK LISREAMQVW
201: IDYHGERKEI NVTLAPFDMA KPARPLLSAS YDLSTVLTEL VYLGFSAATG RVNSRHFVLG WSLGVSTEAP AIDMAKLPKL PRVGPKPRSK VFDIVLPIVT
301: ATFVLGLGGI IILVMRRRSR YTELREDWEV EFGPHRFLYK DLFRATEGFK DKHLLGAGGF GRVYRGVLET SKLEVAVKRV SHESRQGMRE FIAEITSIGR
401: IRHRNLVELL GYCRRKGELL LVYAYMPNGS LDKHLYNTRE GQPTLNWALR FQIVNDVASG LLYLHQRWEK VVIHRDIKAS NVLLDKDMNG QLGDFGLARL
501: YDHGADSQTT HVVGTMGYLA PELIRTGRVS PLTDMFAFGI FLLEVACGQK PIKENAQGGQ IALVDWVLEH WRDGTLMETV DARLQGGFDI HQAGLVLTLG
601: LMCSHPLASA RPAIGQVMRY LAGVTPLPEL TPTDVLTLMQ NKGFDESAMS YPDLVSSFGT ISTLSGGR
Best Arabidopsis Sequence Match ( AT3G53810.1 )
(BLAST)
001: MFVKLKLIFF FFLLCQIMIS SSQNLNFTYN GFHPPLTDIS LQGLATVTPN GLLKLTNTSV QKTGHAFCTE RIRFKDSQNG NVSSFSTTFV FAIHSQIPTL
101: SGHGIAFVVA PTLGLPFALP SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD HDKFQNLSLI SRKRIQVWID
201: YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS
301: LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL DADFNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL
601: CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK GFTGGSSIAD SLLSGGR
Arabidopsis Description
LECRK42L-type lectin-domain containing receptor kinase IV.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M345]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.