CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol, mitochondrion, nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	EES01631	AT2G41090.1	17360592
AT4G02410.1	EES09201	AT2G41090.1	17360592
AT4G02410.1	EES16322	AT2G41090.1	17360592
AT4G02410.1	OQU78227	AT2G41090.1	17360592
AT4G02410.1	EES01631	AT2G41100.1	17360592
AT4G02410.1	EES09201	AT2G41100.1	17360592
AT4G02410.1	EES16322	AT2G41100.1	17360592
AT4G02410.1	OQU78227	AT2G41100.1	17360592
AT4G02410.1	KXG37587	AT4G14640.1	17360592
AT4G02410.1	KXG37588	AT4G14640.1	17360592
AT4G02410.1	EES01631	AT5G21274.1	17360592
AT4G02410.1	EES09201	AT5G21274.1	17360592
AT4G02410.1	EES16322	AT5G21274.1	17360592
AT4G02410.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019411_P001	Maize	plasma membrane	85.39	83.89
TraesCS3D01G104100.1	Wheat	plasma membrane	75.71	75.71
TraesCS3B01G119200.1	Wheat	plasma membrane	45.45	74.94
TraesCS3A01G101700.1	Wheat	plasma membrane	75.11	74.78
Os07t0283125-00	Rice	plasma membrane	74.52	74.74
TraesCS3B01G119600.1	Wheat	plasma membrane	74.37	74.26
HORVU3Hr1G018500.1	Barley	plasma membrane	74.52	73.75
HORVU3Hr1G018610.1	Barley	plasma membrane	74.22	73.34
OQU88393	Sorghum	cytosol	47.69	66.67
OQU76295	Sorghum	cytosol, nucleus, plastid	52.01	61.55
KXG24409	Sorghum	plasma membrane	60.21	60.48
OQU76282	Sorghum	plasma membrane	57.23	60.47
EER93380	Sorghum	plasma membrane	61.25	60.18
EER97934	Sorghum	plasma membrane	61.4	60.15
OQU78436	Sorghum	cytosol	51.56	59.97
OQU76281	Sorghum	plasma membrane	61.4	59.88
EER97932	Sorghum	plasma membrane	61.7	59.48
KXG19863	Sorghum	plasma membrane	59.17	59.43
EER95837	Sorghum	plasma membrane	59.17	59.08
OQU90148	Sorghum	plasma membrane	59.76	58.8
OQU88865	Sorghum	plasma membrane	50.07	58.64
KXG24408	Sorghum	plasma membrane	57.53	58.22
EES12555	Sorghum	plasma membrane	58.42	58.07
KXG22552	Sorghum	plasma membrane	54.25	57.78
OQU76297	Sorghum	plasma membrane	49.93	57.07
EER90817	Sorghum	plasma membrane	54.55	56.83
OQU82016	Sorghum	plasma membrane	58.12	56.44
EER99594	Sorghum	plasma membrane	56.33	55.26
KXG34333	Sorghum	plasma membrane	58.87	55.09
KXG38456	Sorghum	plasma membrane	55.74	54.44
EER94173	Sorghum	plasma membrane	56.93	54.42
EER93379	Sorghum	plasma membrane	54.84	54.2
EES07549	Sorghum	cytosol, plasma membrane, plastid	52.31	53.67
KRH49145	Soybean	plasma membrane	52.91	53.22
AT2G37710.1	Thale cress	plasma membrane	53.35	53.04
KRH00016	Soybean	plasma membrane	52.46	52.77
CDY65835	Canola	plasma membrane	51.56	52.5
AT3G53810.1	Thale cress	plasma membrane	52.91	52.44
PGSC0003DMT400022983	Potato	plasma membrane	51.42	51.88
VIT_08s0007g00810.t01	Wine grape	plasma membrane	52.46	51.76
CDX91384	Canola	plasma membrane	51.71	51.56
Bra005168.1-P	Field mustard	plasma membrane	51.71	51.56
PGSC0003DMT400052365	Potato	plasma membrane	51.12	51.5
Solyc09g011990.1.1	Tomato	plasma membrane	50.82	51.05
CDY21254	Canola	plasma membrane	49.48	51.0
CDX91325	Canola	cytosol, mitochondrion	19.97	50.76
OQU84848	Sorghum	plasma membrane	53.35	50.64
OQU88397	Sorghum	cytosol, plasma membrane, plastid	48.88	50.0
Bra035326.1-P	Field mustard	plasma membrane	49.78	49.78
AT4G02420.1	Thale cress	plasma membrane	49.48	49.63
Bra018553.1-P	Field mustard	plasma membrane	49.33	49.63
CDY55369	Canola	plasma membrane	49.48	49.55
AT4G02410.1	Thale cress	plasma membrane	49.63	49.41
PGSC0003DMT400022743	Potato	plasma membrane	49.03	49.25
CDX90939	Canola	plasma membrane	48.44	49.17
CDY02414	Canola	plasma membrane	43.22	49.15
Solyc09g012000.1.1	Tomato	plasma membrane	48.88	49.03
Bra000881.1-P	Field mustard	plasma membrane	49.18	48.89
Bra000880.1-P	Field mustard	plasma membrane	46.94	46.39
KXG37241	Sorghum	mitochondrion	45.75	42.58
EER94566	Sorghum	plasma membrane	42.62	42.25
EES17246	Sorghum	plasma membrane	43.07	41.7
Solyc09g011060.2.1	Tomato	plasma membrane	49.03	39.54
GSMUA_Achr9P09920_001	Banana	plasma membrane	40.69	28.8
OQU92890	Sorghum	plasma membrane	56.63	28.59
GSMUA_Achr9P10000_001	Banana	cytosol	42.77	14.97

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	EntrezGene:8084620	UniProt:C5X3L9
InterPro:ConA-like_dom_sf	EnsemblPlants:EER98367	ProteinID:EER98367	ProteinID:EER98367.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:Legume_lectin_dom	PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27007	PANTHER:PTHR27007:SF25	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3002G107900
SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A83FB5
RefSeq:XP_002461846.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:13034888..13037119

Molecular Weight (calculated)

74267.8 Da

IEP (calculated)

6.641

GRAVY (calculated)

-0.051

Length

671 amino acids

Sequence
(BLAST)

001: MSSNTKPAVS MLLQLLFLSL NLLAAFTTGD GQQFVYSGFS NNDLLVDGAT MITSNGLLEL TNGTDQQIGH AFYPTPLRFT RSPNGTVQSF STSFVFAIQS
101: VYTDLSAHGM AFIVAPSRNF SAALPGQFLG LTDIQNNGNS SNHFFTVELD TIENKEFSDI NANHAGANVN GLKSLNSSSA GYYADEDGKF HNLSLISREA
201: MQVWMDYDDS VSSITVTMAP LKVARPKKPL FTTTYNLTSV VTDVAYIGFS SATGTINVRH YVLGWSFNMS GPAPSIDISR LPELPRMSPK QSKVLQIVLP
301: IASAAFVLAV GTVVFLLVRR HLKYAELRED WEVEFGPHRF SYKDLFYATE GFKDKHLLGI GGFGRVYKGI LPVSKLEVAV KRVSHDSRQG MKEFIAEVVS
401: IGRIQHRNLV RVLGYCRRRG ELFLVYEYMP CGSVDKYLYG IEGKPILSWA NRWHIIKGIA SCLVYLHEEW EKVVIHRDIK PSNVLLDGDM NGRLGDFGLA
501: RLYDHDTDPQ TTHVVGTIGY LAPELGHTSK ATPLTDVFSF GTFLLEITCG RRPISESSQE SQCMLVDWVL ERWISGSLLE TVDSRLQGNY NTAEACLALK
601: LGLLCSHPFS NSRPTTRQVM QYLDGEMSLP EMTPTDMSFH MMAIMQNQGF DDYITGSTAS IGTTSVVSSG R

Best Arabidopsis Sequence Match ( AT3G53810.1 )
(BLAST)

001: MFVKLKLIFF FFLLCQIMIS SSQNLNFTYN GFHPPLTDIS LQGLATVTPN GLLKLTNTSV QKTGHAFCTE RIRFKDSQNG NVSSFSTTFV FAIHSQIPTL
101: SGHGIAFVVA PTLGLPFALP SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD HDKFQNLSLI SRKRIQVWID
201: YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS
301: LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL DADFNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL
601: CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK GFTGGSSIAD SLLSGGR

Arabidopsis Description

LECRK42L-type lectin-domain containing receptor kinase IV.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M345]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.