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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 EES01631 AT2G41090.1 17360592
AT4G02410.1 EES09201 AT2G41090.1 17360592
AT4G02410.1 EES16322 AT2G41090.1 17360592
AT4G02410.1 OQU78227 AT2G41090.1 17360592
AT4G02410.1 EES01631 AT2G41100.1 17360592
AT4G02410.1 EES09201 AT2G41100.1 17360592
AT4G02410.1 EES16322 AT2G41100.1 17360592
AT4G02410.1 OQU78227 AT2G41100.1 17360592
AT4G02410.1 KXG37587 AT4G14640.1 17360592
AT4G02410.1 KXG37588 AT4G14640.1 17360592
AT4G02410.1 EES01631 AT5G21274.1 17360592
AT4G02410.1 EES09201 AT5G21274.1 17360592
AT4G02410.1 EES16322 AT5G21274.1 17360592
AT4G02410.1 OQU78227 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028455_P001 Maize plasma membrane 44.17 90.17
OQU88393 Sorghum cytosol 21.67 60.0
EES12555 Sorghum plasma membrane 30.4 59.85
OQU82016 Sorghum plasma membrane 30.93 59.48
OQU76295 Sorghum cytosol, nucleus, plastid 25.21 59.08
EER93380 Sorghum plasma membrane 29.72 57.83
OQU90148 Sorghum plasma membrane 29.35 57.18
EER90817 Sorghum plasma membrane 27.46 56.68
EER98367 Sorghum plasma membrane 28.59 56.63
OQU78436 Sorghum cytosol 24.53 56.5
EER99594 Sorghum plasma membrane 29.04 56.43
EES07549 Sorghum cytosol, plasma membrane, plastid 27.77 56.42
EER97934 Sorghum plasma membrane 29.04 56.35
EER95837 Sorghum plasma membrane 28.29 55.95
OQU76282 Sorghum plasma membrane 26.71 55.91
KXG38456 Sorghum plasma membrane 28.59 55.31
KXG24409 Sorghum plasma membrane 27.77 55.24
EER93379 Sorghum plasma membrane 28.22 55.23
OQU76297 Sorghum plasma membrane 24.38 55.2
KXG24408 Sorghum plasma membrane 27.46 55.05
EER97932 Sorghum plasma membrane 28.82 55.03
KXG19863 Sorghum plasma membrane 27.54 54.79
CDX91325 Canola cytosol, mitochondrion 10.84 54.55
EER94173 Sorghum plasma membrane 28.67 54.27
KXG34333 Sorghum plasma membrane 28.97 53.7
OQU76281 Sorghum plasma membrane 27.77 53.63
KRH00016 Soybean plasma membrane 26.79 53.37
OQU88865 Sorghum plasma membrane 22.95 53.23
KRH49145 Soybean plasma membrane 26.71 53.22
OQU88397 Sorghum cytosol, plasma membrane, plastid 26.19 53.05
VIT_08s0007g00810.t01 Wine grape plasma membrane 27.09 52.94
KXG22552 Sorghum plasma membrane 24.91 52.54
Solyc09g011990.1.1 Tomato plasma membrane 26.34 52.4
PGSC0003DMT400052365 Potato plasma membrane 26.19 52.25
PGSC0003DMT400022983 Potato plasma membrane 26.11 52.18
AT2G37710.1 Thale cress plasma membrane 26.34 51.85
AT3G53810.1 Thale cress plasma membrane 26.26 51.55
CDY21254 Canola plasma membrane 25.13 51.31
CDY65835 Canola plasma membrane 25.43 51.29
Bra005168.1-P Field mustard plasma membrane 25.96 51.26
CDX91384 Canola plasma membrane 25.96 51.26
PGSC0003DMT400022743 Potato plasma membrane 25.51 50.75
OQU84848 Sorghum plasma membrane 26.94 50.64
Bra035326.1-P Field mustard plasma membrane 25.51 50.52
CDY02414 Canola plasma membrane 22.05 49.66
Solyc09g012000.1.1 Tomato plasma membrane 24.98 49.63
Bra018553.1-P Field mustard plasma membrane 24.76 49.33
CDY55369 Canola plasma membrane 24.68 48.96
CDX90939 Canola plasma membrane 24.23 48.71
AT4G02420.1 Thale cress plasma membrane 24.3 48.28
Bra000881.1-P Field mustard plasma membrane 24.45 48.15
AT4G02410.1 Thale cress plasma membrane 24.23 47.77
Bra000880.1-P Field mustard plasma membrane 24.15 47.28
KXG37241 Sorghum mitochondrion 23.7 43.69
EER94566 Sorghum plasma membrane 21.97 43.13
EES17246 Sorghum plasma membrane 22.05 42.28
Solyc09g011060.2.1 Tomato plasma membrane 25.21 40.26
GSMUA_Achr9P09920_001 Banana plasma membrane 20.99 29.43
GSMUA_Achr9P10000_001 Banana cytosol 21.37 14.81
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20UniProt:A0A1Z5SAB9InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Lectin_legB_Mn/Ca_BSInterPro:Legume_lectin_domEnsemblPlants:OQU92890ProteinID:OQU92890
ProteinID:OQU92890.1PFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108ScanProsite:PS00307
PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF33InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
EnsemblPlantsGene:SORBI_3001G431600SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI000B8BA1E3SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:+:71058583..71063355
Molecular Weight (calculated)
146172.0 Da
IEP (calculated)
6.458
GRAVY (calculated)
0.024
Length
1329 amino acids
Sequence
(BLAST)
0001: MLPTFFLFLV TLDHLVAAMD ETAFTFNGFS SANLSLDGMA TVTPDGLLML TNGTTALKGH AFHPTPLRFH GANEQHTVAS FSTAFVFGII GQYPDVSSQG
0101: MAFVVSASRN FTTALPGHFL GLVNAADNGN ASNHLFAIEL DTVLNAEFRD IDDNHVGVDV NSLTSVRAAS AGYYDDQTGS FRNLSLISRK AMQVWVEYDG
0201: RAMELNVTMA PVEMPKPKKP LLSTVVNLSE VATDQAYVGF SSATGIIFSH HYVLGWSFRM NGEAPALNVS MLPALPRTAG NTRRKVLEVV LPIASVVFVV
0301: ALATAIVVVA KRRAKFAELR EDWEAGFGSH RFAYKDLFYA TGGFKDKNLL GRGGFGRVYM GVLPKSKVQV AVKRVSHESR QGIKEFVAEI VSLGRLRHRS
0401: VVQLLGYCRR RGELLLVYDY MPNGSLDRYL HDQDKPALDW GQRFKIIKDV ASGLLYLHED WEKVVIHRDI KASNVLLDAE MNGRLGDFGL SRMYDHGTDP
0501: NTTHVVGTMG YLAPELGHRA KAAPPTDVFA FGVFLLEVTC GKPPVEEDAQ GSQAVLVDWV LHHWRNGSIM EAADPRLGDD YAAREVQLVL KLGLHCSHPL
0601: ASARPSMRRV VQCLDGDMVF SENEVMPMNF SFSMATLMKD QQLELDAMAC ELSSASSAGT MSSTLSISIL LLFVLHKIER VSSANNEQFT YEGFTGANLT
0701: LDGAAAVTPS GLLALTNDKH TKGHAFFPAP LHFHRPVSGT TLQSFSATFV FAISSEHAQL SDHGLAFVLA PSSNLSDATG AQYLGLLNIS NNGKPSNHIL
0801: AVELDTVLSP EFHDIDSNHV GIDVNNLQSM ESHTAGYYED GTGKFLNLTL MSRKVMQLWV DYSGQAMELN VTLAPLDVEK PKDPLLSTAI NLSEIVNTTA
0901: YVGFSSATGL SIAYHYILGW SFSLNGAAPV LNSSNLPELP RLPHQKRSLS ETLVIVLPFA TAGFIIALLI VVFMFMQRWL RYAELREDWE VEFGPHRFSY
1001: KDLFHATKGF VSKQLLGTGG FGRVYKGVLL ESNLEIAVKM VSHDSKQGMK EFIAEIVSMG KLRHKNLVQL LGYCRRKGEL LLVYDYMSNG SLDKHLYDQS
1101: RPVLSWNMRF HIIKGIASGL LYLHEDWEQV VVHRDIKASN VLLDSEMNGC LGDFGLAKMY SHGTNPRTTN VVGTMGYLSP ELLRTGKASP GTDVFAFGMF
1201: LLEVTCGRRP LEHDQVVLLD WVLEHWNKGA ILDTVDARLS DQYSAEEASL VLKLGLLCLQ PMPNARPSMR QVLQYLDGTL TVPEMAMMNL DYGTLMFLQS
1301: EGFDSYAMLD ASSFATTSIG PGSDLSGGR
Best Arabidopsis Sequence Match ( AT3G53810.1 )
(BLAST)
001: MFVKLKLIFF FFLLCQIMIS SSQNLNFTYN GFHPPLTDIS LQGLATVTPN GLLKLTNTSV QKTGHAFCTE RIRFKDSQNG NVSSFSTTFV FAIHSQIPTL
101: SGHGIAFVVA PTLGLPFALP SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD HDKFQNLSLI SRKRIQVWID
201: YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS
301: LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL DADFNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL
601: CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK GFTGGSSIAD SLLSGGR
Arabidopsis Description
LECRK42L-type lectin-domain containing receptor kinase IV.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M345]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.