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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 EES01631 AT2G41090.1 17360592
AT4G02410.1 EES09201 AT2G41090.1 17360592
AT4G02410.1 EES16322 AT2G41090.1 17360592
AT4G02410.1 OQU78227 AT2G41090.1 17360592
AT4G02410.1 EES01631 AT2G41100.1 17360592
AT4G02410.1 EES09201 AT2G41100.1 17360592
AT4G02410.1 EES16322 AT2G41100.1 17360592
AT4G02410.1 OQU78227 AT2G41100.1 17360592
AT4G02410.1 KXG37587 AT4G14640.1 17360592
AT4G02410.1 KXG37588 AT4G14640.1 17360592
AT4G02410.1 EES01631 AT5G21274.1 17360592
AT4G02410.1 EES09201 AT5G21274.1 17360592
AT4G02410.1 EES16322 AT5G21274.1 17360592
AT4G02410.1 OQU78227 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU88393 Sorghum cytosol 41.3 60.83
EER90817 Sorghum plasma membrane 53.47 58.7
EER93380 Sorghum plasma membrane 56.58 58.57
OQU76295 Sorghum cytosol, nucleus, plastid 46.68 58.2
Os02t0298200-01 Rice plasma membrane 47.95 57.36
EES12555 Sorghum plasma membrane 54.03 56.59
Os02t0299000-00 Rice mitochondrion 47.1 56.35
EER97934 Sorghum plasma membrane 54.31 56.06
OQU90148 Sorghum plasma membrane 53.89 55.87
OQU76282 Sorghum plasma membrane 49.93 55.59
EER95837 Sorghum plasma membrane 52.19 54.91
EER97932 Sorghum plasma membrane 53.89 54.74
KXG24409 Sorghum plasma membrane 51.63 54.64
OQU78436 Sorghum cytosol 44.55 54.59
KXG38456 Sorghum plasma membrane 52.9 54.44
EER99594 Sorghum plasma membrane 52.62 54.39
OQU76281 Sorghum plasma membrane 52.62 54.07
OQU88865 Sorghum plasma membrane 43.71 53.93
EER94173 Sorghum plasma membrane 53.18 53.56
CDX91325 Canola cytosol, mitochondrion 19.94 53.41
EER98367 Sorghum plasma membrane 50.64 53.35
KXG22552 Sorghum plasma membrane 47.52 53.33
KXG19863 Sorghum plasma membrane 50.21 53.14
OQU82016 Sorghum plasma membrane 51.77 52.97
KXG24408 Sorghum plasma membrane 49.65 52.94
EES07549 Sorghum cytosol, plasma membrane, plastid 48.94 52.91
KXG34333 Sorghum plasma membrane 52.76 52.02
OQU76297 Sorghum plasma membrane 42.86 51.62
EER93379 Sorghum plasma membrane 48.51 50.52
KRH00016 Soybean plasma membrane 47.52 50.37
KRH49145 Soybean plasma membrane 47.52 50.37
VIT_08s0007g00810.t01 Wine grape plasma membrane 47.81 49.71
OQU88397 Sorghum cytosol, plasma membrane, plastid 45.83 49.39
CDX91384 Canola plasma membrane 46.82 49.18
AT3G53810.1 Thale cress plasma membrane 46.96 49.04
Bra005168.1-P Field mustard plasma membrane 46.68 49.03
CDY65835 Canola plasma membrane 45.69 49.01
PGSC0003DMT400052365 Potato plasma membrane 46.11 48.95
AT2G37710.1 Thale cress plasma membrane 46.53 48.74
CDY21254 Canola plasma membrane 44.55 48.39
PGSC0003DMT400022983 Potato plasma membrane 45.26 48.12
Solyc09g011990.1.1 Tomato plasma membrane 45.4 48.05
AT4G02410.1 Thale cress plasma membrane 45.54 47.77
Bra018553.1-P Field mustard plasma membrane 44.98 47.68
CDY55369 Canola plasma membrane 45.12 47.61
Bra035326.1-P Field mustard plasma membrane 44.98 47.39
Solyc09g012000.1.1 Tomato plasma membrane 44.55 47.09
CDX90939 Canola plasma membrane 43.85 46.9
PGSC0003DMT400022743 Potato plasma membrane 44.13 46.71
Bra000881.1-P Field mustard plasma membrane 44.55 46.67
AT4G02420.1 Thale cress plasma membrane 43.99 46.49
CDY02414 Canola plasma membrane 38.76 46.44
Bra000880.1-P Field mustard plasma membrane 43.85 45.66
EES17246 Sorghum plasma membrane 43.71 44.59
KXG37241 Sorghum mitochondrion 45.12 44.24
EER94566 Sorghum plasma membrane 41.73 43.57
Solyc09g011060.2.1 Tomato plasma membrane 45.26 38.46
GSMUA_Achr9P09920_001 Banana plasma membrane 37.2 27.74
OQU92890 Sorghum plasma membrane 50.64 26.94
GSMUA_Achr9P10000_001 Banana cytosol 38.47 14.19
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20UniProt:A0A1Z5RMA4InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Lectin_legB_Mn/Ca_BSInterPro:Legume_lectin_domEnsemblPlants:OQU84848ProteinID:OQU84848
ProteinID:OQU84848.1PFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108ScanProsite:PS00307
PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF129InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
EnsemblPlantsGene:SORBI_3004G132400SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI000B8B9D3FSEG:seg::::
Description
hypothetical protein
Coordinates
chr4:+:19821210..19823493
Molecular Weight (calculated)
76581.3 Da
IEP (calculated)
6.474
GRAVY (calculated)
0.105
Length
707 amino acids
Sequence
(BLAST)
001: MIEAKRVLPL LFLYGLHLAP AFAAGDCSSD GDKFVYSSFA AASLTLDGAA MVTPRGLLQL TSETALSKGH AFHPTPLQLR APLCGAQKKA AAAVRSFSAS
101: FVFGIVPVTP GMGGHGLALV VAPSKDLSSA MASNYIGLLN SSSNGSVHNH IVAVELDTIQ SPEFHDINDN HVGVDVNSLV SVDAASAGYY DDRTGELRNL
201: TLVSGEVMRA WVDYDGDATR IDVTLAPVGT ERPKKPLVSA TVDLSTVIIA DVAYVGFSSS TGRLSTLHYV LGWSFAVGGP APAIDMASLP PLPDRRNSGS
301: RSRPSKTMTL AIALPVAVGA LAIIIAMAAC VLLVVRRRYI ELREDWEIEF GAHRLPYKDL FLATDGFKDK NLLGLGGFGK VYKGVLPTSG MEVAVKRVWH
401: ESEQGMKEFV AEVATIGRLR HRNLVQLLGY CRLKDQLLLV YDYMPNGSLE KHLYSHDNNT STVLNWAQRF QIIKGVASGL LYIHEEWEQV VIHRDVKASN
501: VLLDSEMNAR LGDFGLARLR SHDTELLHTT VVAGTFGYIA PELALTGKAS PLTDVFAFGA FLLEVVTGRR PVEETIDGDR LLLVDWVFEQ WRKDQSLIEV
601: VVDPRIQGDY DVNELSLTLR VGLLCSHPLA SVRPSMRTVM QYLAGDMPLP ELTMPTHMGI MSMLALLQSQ GFDSSVMATS SSSSSSMRSS STLLSQKGDD
701: KSNVHVP
Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.