CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	EES01631	AT2G41090.1	17360592
AT4G02410.1	EES09201	AT2G41090.1	17360592
AT4G02410.1	EES16322	AT2G41090.1	17360592
AT4G02410.1	OQU78227	AT2G41090.1	17360592
AT4G02410.1	EES01631	AT2G41100.1	17360592
AT4G02410.1	EES09201	AT2G41100.1	17360592
AT4G02410.1	EES16322	AT2G41100.1	17360592
AT4G02410.1	OQU78227	AT2G41100.1	17360592
AT4G02410.1	KXG37587	AT4G14640.1	17360592
AT4G02410.1	KXG37588	AT4G14640.1	17360592
AT4G02410.1	EES01631	AT5G21274.1	17360592
AT4G02410.1	EES09201	AT5G21274.1	17360592
AT4G02410.1	EES16322	AT5G21274.1	17360592
AT4G02410.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034671_P001	Maize	plasma membrane	85.58	90.47
Os03t0823000-01	Rice	plasma membrane	69.76	71.75
TraesCS5A01G484600.1	Wheat	plasma membrane	67.13	70.35
TraesCS5A01G484300.1	Wheat	plasma membrane	64.49	67.2
HORVU5Hr1G114030.4	Barley	plasma membrane	67.27	67.17
CDX91325	Canola	cytosol, mitochondrion	19.56	53.41
EER90817	Sorghum	plasma membrane	45.35	50.78
PGSC0003DMT400022983	Potato	plasma membrane	46.46	50.38
KRH49145	Soybean	plasma membrane	46.6	50.37
EER94173	Sorghum	plasma membrane	48.54	49.86
AT2G37710.1	Thale cress	plasma membrane	46.6	49.78
KRH00016	Soybean	plasma membrane	46.05	49.78
CDY21254	Canola	plasma membrane	44.8	49.62
CDX91384	Canola	plasma membrane	46.05	49.33
VIT_08s0007g00810.t01	Wine grape	plasma membrane	46.46	49.26
PGSC0003DMT400052365	Potato	plasma membrane	45.49	49.25
OQU88393	Sorghum	cytosol	32.73	49.17
Bra005168.1-P	Field mustard	plasma membrane	45.77	49.03
OQU90148	Sorghum	plasma membrane	46.19	48.83
CDY65835	Canola	plasma membrane	44.52	48.71
EER93380	Sorghum	plasma membrane	46.05	48.61
CDY02414	Canola	plasma membrane	39.53	48.31
EES12555	Sorghum	plasma membrane	45.22	48.3
Bra035326.1-P	Field mustard	plasma membrane	44.94	48.29
AT3G53810.1	Thale cress	plasma membrane	45.08	48.01
OQU76295	Sorghum	cytosol, nucleus, plastid	37.73	47.97
OQU78436	Sorghum	cytosol	38.28	47.83
EER99594	Sorghum	plasma membrane	45.35	47.81
PGSC0003DMT400022743	Potato	plasma membrane	44.24	47.75
EER93379	Sorghum	plasma membrane	44.94	47.72
Solyc09g011990.1.1	Tomato	plasma membrane	43.97	47.46
KXG38456	Sorghum	plasma membrane	45.22	47.45
AT4G02420.1	Thale cress	plasma membrane	43.55	46.94
Solyc09g012000.1.1	Tomato	plasma membrane	43.55	46.94
Bra018553.1-P	Field mustard	plasma membrane	43.27	46.78
OQU76282	Sorghum	plasma membrane	41.19	46.77
OQU82016	Sorghum	plasma membrane	44.8	46.74
KXG24409	Sorghum	plasma membrane	43.27	46.71
Bra000881.1-P	Field mustard	plasma membrane	43.69	46.67
EER95837	Sorghum	plasma membrane	43.41	46.58
CDY55369	Canola	plasma membrane	43.27	46.57
AT4G02410.1	Thale cress	plasma membrane	43.41	46.44
CDX90939	Canola	plasma membrane	42.44	46.29
Bra000880.1-P	Field mustard	plasma membrane	43.41	46.1
OQU76281	Sorghum	plasma membrane	43.83	45.93
EES07549	Sorghum	cytosol, plasma membrane, plastid	41.61	45.87
KXG24408	Sorghum	plasma membrane	42.16	45.85
EER97932	Sorghum	plasma membrane	44.24	45.83
EER98367	Sorghum	plasma membrane	42.58	45.75
EER97934	Sorghum	plasma membrane	43.41	45.69
KXG22552	Sorghum	plasma membrane	39.81	45.56
KXG19863	Sorghum	plasma membrane	42.16	45.51
OQU76297	Sorghum	plasma membrane	36.89	45.32
OQU84848	Sorghum	plasma membrane	44.24	45.12
OQU88397	Sorghum	cytosol, plasma membrane, plastid	40.92	44.97
OQU88865	Sorghum	plasma membrane	35.37	44.5
KXG34333	Sorghum	plasma membrane	44.24	44.49
EES17246	Sorghum	plasma membrane	41.19	42.86
EER94566	Sorghum	plasma membrane	39.53	42.1
Solyc09g011060.2.1	Tomato	plasma membrane	43.97	38.1
GSMUA_Achr9P09920_001	Banana	plasma membrane	35.78	27.22
OQU92890	Sorghum	plasma membrane	43.69	23.7
GSMUA_Achr9P10000_001	Banana	cytosol	34.26	12.88

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	UniProt:A0A1B6QH47	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	GO:GO:0046983	InterPro:IPR000719	EnsemblPlants:KXG37241
ProteinID:KXG37241	ProteinID:KXG37241.2	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	PFAM:PF00069	PFAM:PF00139
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF141	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G032400	SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI000B424D51	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:2465532..2468560

Molecular Weight (calculated)

77377.8 Da

IEP (calculated)

6.832

GRAVY (calculated)

-0.070

Length

721 amino acids

Sequence
(BLAST)

001: MHTRRFARRW QPPQSSRSLP RSAMPAAALA VRVAVLLLVA RGGSAAGAAA VEFVLTGFAH DNVTTSGAAV VTSSGLLQLT NETNEVFGHG FYPVPLRFRD
101: DASSSSSTGA PRPQSFSFST TFVFAMVPRH DDAHGHGIAF ALAPSPTVPG AVAGKNLGLF NTSNDTGRMR SGVVAVELDT ARDEEFNDIN DNHVGIDVNS
201: LVSVGSAPAA YVDVGVGGSL VNVSVNLVSG EPLQAWVEYD GASMRLEVTV APARKPRPSV PLVSSIVNLS SAVADDTYVG FTAANGAASS SHYVLGWSFR
301: LGGGRAPDLD LSKLPSVPSS RSSKKTTSQL LVVTLSLAVV VALLLASVVV AVVVVRRRRF AEEEEDWEIE YGPHRIRYKD LHAATGGFRD VIGEGGFGRV
401: YHGVLLRPAA AEVAVKKVSH DSRQGLREFV SEIASMSRLR HRNLVQLLGY CRRQGELILV YDYMVNGSLD RRLFDAGKPV LSWEQRGKIV RDVAAGLLYL
501: HEGWEQVVVH RDIKSANVLL DADMNGKLSD FGLARLYDHG SNPQTTHVIG TLGYLAPEMS KTGKATTSTD VFAFGAFLLE VACGRRPMQR NDDVDSPGLV
601: DLVLECWKAG RIVEARDPKI GKCDEADVEL VLKLGLLCSH PDPRCRPSMR QAVQILEGAA PVPETPPKDL ANNNRLFYGY SESFDEFATI FPATSEVTSV
701: TTQPSSSHST GEEQQVSSGS G

Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)

001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR

Arabidopsis Description

LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.