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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 EES01631 AT2G41090.1 17360592
AT4G02410.1 EES09201 AT2G41090.1 17360592
AT4G02410.1 EES16322 AT2G41090.1 17360592
AT4G02410.1 OQU78227 AT2G41090.1 17360592
AT4G02410.1 EES01631 AT2G41100.1 17360592
AT4G02410.1 EES09201 AT2G41100.1 17360592
AT4G02410.1 EES16322 AT2G41100.1 17360592
AT4G02410.1 OQU78227 AT2G41100.1 17360592
AT4G02410.1 KXG37587 AT4G14640.1 17360592
AT4G02410.1 KXG37588 AT4G14640.1 17360592
AT4G02410.1 EES01631 AT5G21274.1 17360592
AT4G02410.1 EES09201 AT5G21274.1 17360592
AT4G02410.1 EES16322 AT5G21274.1 17360592
AT4G02410.1 OQU78227 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0130200-01 Rice plasma membrane 75.73 75.73
TraesCS6D01G191400.1 Wheat plasma membrane 73.55 75.19
HORVU6Hr1G053090.1 Barley cytosol, plasma membrane 73.26 71.19
OQU88393 Sorghum cytosol 47.97 68.75
EER97932 Sorghum plasma membrane 63.81 63.07
EER93380 Sorghum plasma membrane 62.21 62.66
OQU76295 Sorghum cytosol, nucleus, plastid 51.31 62.26
EER98367 Sorghum plasma membrane 59.88 61.4
OQU78436 Sorghum cytosol 51.45 61.35
EER97934 Sorghum plasma membrane 60.76 61.02
OQU76282 Sorghum plasma membrane 55.81 60.47
KXG24409 Sorghum plasma membrane 56.83 58.53
KXG19863 Sorghum plasma membrane 56.69 58.38
EES12555 Sorghum plasma membrane 57.27 58.37
KXG22552 Sorghum plasma membrane 53.2 58.1
OQU82016 Sorghum plasma membrane 57.99 57.74
EER95837 Sorghum plasma membrane 56.1 57.44
OQU76297 Sorghum plasma membrane 48.55 56.9
OQU88865 Sorghum plasma membrane 47.38 56.89
OQU90148 Sorghum plasma membrane 56.25 56.74
KXG34333 Sorghum plasma membrane 58.87 56.49
KXG38456 Sorghum plasma membrane 56.4 56.48
KXG24408 Sorghum plasma membrane 54.07 56.11
EER90817 Sorghum plasma membrane 52.47 56.06
EER94173 Sorghum plasma membrane 56.69 55.56
EER99594 Sorghum plasma membrane 55.09 55.41
EER93379 Sorghum plasma membrane 54.07 54.79
KRH00016 Soybean plasma membrane 52.62 54.27
EES07549 Sorghum cytosol, plasma membrane, plastid 51.45 54.13
KRH49145 Soybean plasma membrane 52.03 53.67
OQU84848 Sorghum plasma membrane 54.07 52.62
VIT_08s0007g00810.t01 Wine grape plasma membrane 51.6 52.21
AT2G37710.1 Thale cress plasma membrane 51.16 52.15
PGSC0003DMT400052365 Potato plasma membrane 50.44 52.1
Solyc09g011990.1.1 Tomato plasma membrane 50.44 51.95
PGSC0003DMT400022983 Potato plasma membrane 50.15 51.88
CDX91325 Canola cytosol, mitochondrion 19.77 51.52
AT3G53810.1 Thale cress plasma membrane 50.44 51.26
CDY65835 Canola plasma membrane 48.55 50.68
Bra005168.1-P Field mustard plasma membrane 49.56 50.67
Solyc09g012000.1.1 Tomato plasma membrane 49.13 50.52
CDX91384 Canola plasma membrane 49.42 50.52
CDY21254 Canola plasma membrane 47.67 50.38
PGSC0003DMT400022743 Potato plasma membrane 48.4 49.85
OQU88397 Sorghum cytosol, plasma membrane, plastid 47.24 49.54
Bra035326.1-P Field mustard plasma membrane 47.82 49.03
CDX90939 Canola plasma membrane 47.09 49.02
Bra000881.1-P Field mustard plasma membrane 47.97 48.89
CDY55369 Canola plasma membrane 47.24 48.51
AT4G02420.1 Thale cress plasma membrane 46.8 48.13
Bra018553.1-P Field mustard plasma membrane 46.66 48.13
AT4G02410.1 Thale cress plasma membrane 47.09 48.07
CDY02414 Canola plasma membrane 40.99 47.8
Bra000880.1-P Field mustard plasma membrane 44.48 45.07
KXG37241 Sorghum mitochondrion 45.93 43.83
EER94566 Sorghum plasma membrane 42.44 43.13
EES17246 Sorghum plasma membrane 43.17 42.86
Solyc09g011060.2.1 Tomato plasma membrane 48.26 39.9
GSMUA_Achr9P09920_001 Banana plasma membrane 40.12 29.11
OQU92890 Sorghum plasma membrane 53.63 27.77
GSMUA_Achr9P10000_001 Banana cytosol 40.99 14.71
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20UniProt:A0A1W0VSP9InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domEnsemblPlants:OQU76281ProteinID:OQU76281ProteinID:OQU76281.1
PFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007
PANTHER:PTHR27007:SF41InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3010G124700SUPFAM:SSF49899
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0009DC82DESEG:seg
Description
hypothetical protein
Coordinates
chr10:+:15183268..15185343
Molecular Weight (calculated)
74743.4 Da
IEP (calculated)
6.965
GRAVY (calculated)
-0.024
Length
688 amino acids
Sequence
(BLAST)
001: MPQTKITVSF LLGVIHPLAA LVAAGGGDQF VYSGFTGANL TMDGTATITP GGLVELTNGT LQLKGHAFHP TPLSFREGGR TGTGTGIGAV RSFSTSFVFG
101: ILSAYPDMSA HGIVFVVSPT TDFSTALASQ YMGVVNVTSN GDERNRIFGV ELDTLQQDEF RDINDNHVGV DINGLISLHS SDAGYYDDDD GGSFKNLTLI
201: SHDEMRVWVD YDAGSNRVNV TLAPLAVAKP RKPLISAVYN LSSVITDTAY VGFSSATGSF NSRHYVLGWS FAMGDVSAPA IDIAKLPKLP RESTKAGRSK
301: VLLILLPLAS AAAVFCLGAA AVLLVRRRRK YTELREEWEV EFGPHRFSYK DLHRATEGFK NANLLGVGGF GRVYKGVLPI SGTEVAVKRV SSSHSSTQGV
401: KEFVAEVVSL GRLQHRNLVR LLGYCRRKGE LLLVYEYMAN GSLDKYLHGE DEKATATTLS WPQRFKIIKD IASGLLYLHE EWEKVVVHRD IKASNVLLDG
501: GMNGQLGDFG LARLYDHGSD PQSTHVVGYL APELARTSKA TPLTDVFALG TFILEVTCGR RPIFQDANNN QQVMLVDWVL EHWRRGTLVD TVDAKLGGDF
601: VVSEACLVLE LGLMCSHPFV NARPNMRQVA RYLSKELPLP ELMPTDMSFH MLALMQNEGF DSYIQSNPSA SSSKASIGST TSALSVGR
Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.