CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	EES01631	AT2G41090.1	17360592
AT4G02410.1	EES09201	AT2G41090.1	17360592
AT4G02410.1	EES16322	AT2G41090.1	17360592
AT4G02410.1	OQU78227	AT2G41090.1	17360592
AT4G02410.1	EES01631	AT2G41100.1	17360592
AT4G02410.1	EES09201	AT2G41100.1	17360592
AT4G02410.1	EES16322	AT2G41100.1	17360592
AT4G02410.1	OQU78227	AT2G41100.1	17360592
AT4G02410.1	KXG37587	AT4G14640.1	17360592
AT4G02410.1	KXG37588	AT4G14640.1	17360592
AT4G02410.1	EES01631	AT5G21274.1	17360592
AT4G02410.1	EES09201	AT5G21274.1	17360592
AT4G02410.1	EES16322	AT5G21274.1	17360592
AT4G02410.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G463300.1	Wheat	plasma membrane	77.84	77.27
TraesCS5D01G476100.1	Wheat	plasma membrane	61.38	76.35
OQU88393	Sorghum	cytosol	48.35	67.29
Zm00001d053322_P001	Maize	plasma membrane	66.62	65.15
OQU78436	Sorghum	cytosol	52.99	61.35
OQU76295	Sorghum	cytosol, nucleus, plastid	51.95	61.2
KXG19863	Sorghum	plasma membrane	60.63	60.63
EER93380	Sorghum	plasma membrane	61.83	60.47
EER98367	Sorghum	plasma membrane	60.48	60.21
OQU76282	Sorghum	plasma membrane	56.44	59.37
EER97932	Sorghum	plasma membrane	61.68	59.2
EER95837	Sorghum	plasma membrane	59.43	59.08
OQU76297	Sorghum	plasma membrane	51.65	58.77
KXG22552	Sorghum	plasma membrane	54.49	57.78
KXG24408	Sorghum	plasma membrane	57.04	57.47
EER97934	Sorghum	plasma membrane	58.68	57.23
OQU88865	Sorghum	plasma membrane	48.95	57.07
OQU76281	Sorghum	plasma membrane	58.53	56.83
OQU82016	Sorghum	plasma membrane	57.19	55.28
EES12555	Sorghum	plasma membrane	55.54	54.96
EER90817	Sorghum	plasma membrane	52.69	54.66
OQU90148	Sorghum	plasma membrane	55.39	54.25
KXG34333	Sorghum	plasma membrane	57.93	53.97
EER99594	Sorghum	plasma membrane	54.94	53.66
EER94173	Sorghum	plasma membrane	55.69	52.99
KXG38456	Sorghum	plasma membrane	54.19	52.69
EER93379	Sorghum	plasma membrane	53.44	52.58
VIT_08s0007g00810.t01	Wine grape	plasma membrane	52.84	51.91
OQU84848	Sorghum	plasma membrane	54.64	51.63
KRH49145	Soybean	plasma membrane	51.5	51.57
CDX91325	Canola	cytosol, mitochondrion	20.36	51.52
KRH00016	Soybean	plasma membrane	51.35	51.42
EES07549	Sorghum	cytosol, plasma membrane, plastid	50.3	51.38
PGSC0003DMT400022983	Potato	plasma membrane	50.6	50.83
AT2G37710.1	Thale cress	plasma membrane	51.35	50.81
Solyc09g011990.1.1	Tomato	plasma membrane	50.0	50.0
OQU88397	Sorghum	cytosol, plasma membrane, plastid	49.1	50.0
PGSC0003DMT400052365	Potato	plasma membrane	49.55	49.7
CDX91384	Canola	plasma membrane	50.0	49.63
CDY65835	Canola	plasma membrane	48.95	49.62
CDY21254	Canola	plasma membrane	48.35	49.62
Bra005168.1-P	Field mustard	plasma membrane	49.85	49.48
PGSC0003DMT400022743	Potato	plasma membrane	48.65	48.65
AT3G53810.1	Thale cress	plasma membrane	49.25	48.6
Solyc09g012000.1.1	Tomato	plasma membrane	48.65	48.58
Bra035326.1-P	Field mustard	plasma membrane	48.5	48.29
AT4G02410.1	Thale cress	plasma membrane	48.5	48.07
AT4G02420.1	Thale cress	plasma membrane	47.75	47.68
Bra018553.1-P	Field mustard	plasma membrane	47.31	47.38
CDY02414	Canola	plasma membrane	41.77	47.29
Bra000881.1-P	Field mustard	plasma membrane	47.46	46.96
CDX90939	Canola	plasma membrane	46.41	46.9
CDY55369	Canola	plasma membrane	46.41	46.27
Bra000880.1-P	Field mustard	plasma membrane	45.21	44.48
KXG37241	Sorghum	mitochondrion	46.71	43.27
EES17246	Sorghum	plasma membrane	43.71	42.14
EER94566	Sorghum	plasma membrane	42.66	42.1
Solyc09g011060.2.1	Tomato	plasma membrane	48.95	39.3
GSMUA_Achr9P09920_001	Banana	plasma membrane	40.57	28.59
OQU92890	Sorghum	plasma membrane	55.24	27.77
GSMUA_Achr9P10000_001	Banana	cytosol	41.32	14.4

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	UniProt:A0A1B6PFD4	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
InterPro:IPR000719	EnsemblPlants:KXG24409	ProteinID:KXG24409	ProteinID:KXG24409.1	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom
PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007
PANTHER:PTHR27007:SF41	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3007G038200	SUPFAM:SSF49899
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00081ADA86	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:3717665..3719703

Molecular Weight (calculated)

74332.5 Da

IEP (calculated)

6.696

GRAVY (calculated)

-0.041

Length

668 amino acids

Sequence
(BLAST)

001: MVMFHMKPAS LMILKLLLVG IGLTIAPLSA ENNDHHQFVY SGFTNASLTL DSTASITPSG LLELTNGTAM SMGHAFYPTP LRLRDSHNST VQSFSAFFVF
101: GIISIYDDLS SQGLTMLIAP SKTLSALPVQ YLGLLSGSND GNKSNHIFAV ELDTYQKTEF KDINSNHIGI DINSMTSVQS NPAGFFHDQN GTFENLTLSS
201: KEAMQVWVEY DQEKTQIDVT MAPLAMVKPR RPTVFAIQNL SDVLTDVAYI GFSSSTGKLH TQHYVLSWSF AMNSPAPSID LTMLPKLPRL HQKGRRSWVL
301: EVVLPVATAA LLLSLGTIAF LLLRRHFRYA EVREDWELEF GPHRFSYKDL FHATGGFDQN KNLLGVGGFG RVYKGVLPIS RLNVAVKRVS HDSKQGIKEF
401: IAEIVSIGRL QNRNLVQLLG YCRREGELLL VYEYMPNGSL DKYLHNSKED NSVLSWTQRF HIIKGIASGL LYLHEEWEKV VVHRDIKASN VLLDNEMNGR
501: LGDFGLARLY DHGVDPQTTH VVGTIGYLAP ELARSGNATP LTDVFAFGMF VLEVTCGQRP VNHQNMQDSQ LMLVDWVLDK VRKGSFSYDI GEAYLALKIG
601: LLCSHPFANE RPTMRQVMQY LDGEIQPPDL SFEVLASMQS EGIDPYIISY PLSTGCISTM SNVVSGGR

Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)

001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR

Arabidopsis Description

LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.