Factsheet for Zm00001d053322_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
plasma membrane 6
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT4G02410.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT4G02410.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT4G02410.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT4G02410.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT4G02410.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT4G02410.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT4G02410.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT4G02410.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT4G02410.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT4G02410.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT4G02410.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT4G02410.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT4G02410.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT4G02410.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT4G02410.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT4G02410.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT4G02410.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT4G02410.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT4G02410.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT4G02410.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT4G02410.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT4G02410.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT4G02410.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT4G02410.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT4G02410.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT4G02410.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT4G02410.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT4G02410.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT4G02410.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT4G02410.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G463300.1	Wheat	plasma membrane	68.08	69.09
TraesCS5D01G476100.1	Wheat	plasma membrane	53.0	67.41
KXG24409	Sorghum	plasma membrane	65.15	66.62
TraesCS6A01G352800.1	Wheat	plasma membrane	65.59	65.98
TraesCS6B01G385600.1	Wheat	plasma membrane	65.01	65.58
TraesCS6A01G352900.1	Wheat	plasma membrane	64.57	64.95
TraesCS6A01G352700.1	Wheat	plasma membrane	64.57	64.76
Zm00001d019334_P001	Maize	cytosol, peroxisome, plasma membrane	51.24	64.69
TraesCS6D01G335400.1	Wheat	plasma membrane	64.57	64.66
Zm00001d034217_P001	Maize	plasma membrane	63.4	63.86
Zm00001d045838_P001	Maize	plasma membrane	58.71	60.12
Zm00001d019411_P001	Maize	plasma membrane	60.03	60.03
Zm00001d025920_P001	Maize	plasma membrane	58.57	59.79
Zm00001d045839_P001	Maize	plasma membrane	57.39	58.25
Zm00001d019413_P001	Maize	plasma membrane	58.27	58.19
Zm00001d037398_P001	Maize	plasma membrane	57.83	58.17
Zm00001d019333_P001	Maize	plasma membrane	58.57	57.97
CDX91325	Canola	cytosol, mitochondrion	22.11	57.2
Zm00001d032870_P001	Maize	plasma membrane	57.54	57.12
Zm00001d028454_P001	Maize	plasma membrane	49.05	56.4
Zm00001d037397_P001	Maize	plasma membrane	57.54	55.98
Zm00001d021897_P001	Maize	plasma membrane	55.78	55.95
Zm00001d032869_P001	Maize	plasma membrane	55.64	55.64
Zm00001d016009_P001	Maize	plasma membrane	57.1	55.48
Zm00001d032868_P001	Maize	plasma membrane	55.2	54.96
Zm00001d007843_P001	Maize	plasma membrane	55.78	54.35
KRH49145	Soybean	plasma membrane	52.86	54.12
PGSC0003DMT400022983	Potato	plasma membrane	52.27	53.68
Zm00001d021896_P001	Maize	plasma membrane	53.88	53.57
KRH00016	Soybean	plasma membrane	52.12	53.37
AT2G37710.1	Thale cress	plasma membrane	52.27	52.89
PGSC0003DMT400052365	Potato	plasma membrane	51.54	52.85
Bra005168.1-P	Field mustard	plasma membrane	51.83	52.6
CDX91384	Canola	plasma membrane	51.54	52.3
VIT_08s0007g00810.t01	Wine grape	plasma membrane	51.83	52.06
AT3G53810.1	Thale cress	plasma membrane	51.54	51.99
Solyc09g011990.1.1	Tomato	plasma membrane	50.81	51.95
CDY65835	Canola	plasma membrane	49.63	51.44
Solyc09g012000.1.1	Tomato	plasma membrane	49.78	50.82
PGSC0003DMT400022743	Potato	plasma membrane	49.63	50.75
CDY21254	Canola	plasma membrane	48.32	50.69
CDX90939	Canola	plasma membrane	48.9	50.53
AT4G02420.1	Thale cress	plasma membrane	49.05	50.07
Bra000881.1-P	Field mustard	plasma membrane	49.34	49.93
CDY55369	Canola	plasma membrane	48.61	49.55
Bra035326.1-P	Field mustard	plasma membrane	48.61	49.48
Bra018553.1-P	Field mustard	plasma membrane	48.32	49.48
AT4G02410.1	Thale cress	plasma membrane	48.61	49.26
CDY02414	Canola	plasma membrane	42.17	48.81
Zm00001d007803_P001	Maize	plasma membrane	48.9	46.78
Bra000880.1-P	Field mustard	plasma membrane	46.12	46.39
Zm00001d034671_P001	Maize	plasma membrane	45.83	45.89
Zm00001d028455_P001	Maize	plasma membrane	43.19	45.31
Zm00001d043781_P001	Maize	plasma membrane	43.63	44.35
Zm00001d030759_P001	Maize	plasma membrane	44.51	44.06
Zm00001d025921_P001	Maize	extracellular	59.15	41.48
Solyc09g011060.2.1	Tomato	plasma membrane	49.78	40.87
GSMUA_Achr9P09920_001	Banana	plasma membrane	43.34	31.22
Zm00001d024637_P001	Maize	plasma membrane	55.49	28.14
GSMUA_Achr9P10000_001	Banana	cytosol	43.05	15.34

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100501941	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	ProteinID:AQK59273.1
InterPro:ConA-like_dom_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	InterPro:IPR000719
UniProt:K7UQ35	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF28	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI000220EEFC
EnsemblPlantsGene:Zm00001d053322	EnsemblPlants:Zm00001d053322_P001	EnsemblPlants:Zm00001d053322_T001	SEG:seg	:	:

Description

Putative lectin-like receptor protein kinase family protein

Coordinates

chr4:-:226105246..226107297

Molecular Weight (calculated)

74973.3 Da

IEP (calculated)

7.703

GRAVY (calculated)

-0.110

Length

683 amino acids

Sequence
(BLAST)

001: MSSLLKLVVF LGLTFATSFA RSNDPMFAYN GFSNTNLELD GTASITENGL LELTNGKVMS KGHAFFPDPL RFRRSPNSTV QSFSASFVFG IISVYNNLSS
101: HGLAMFVAPG KDFSAATPVG YLGLFNAQND GNGTNRVFAL ELDTYQNSEF QDIDNNHVGI NVNGLHSVES HAAGFYRDRN GTSESFEDLT LCSQQAMQVW
201: VDYDSESARI SSTVAPLNTA RPKRPTVSAS YNLSAVLADV AYVGFSSSTG KINSRHYVLG WSFAMNGPAP AIDTSSLPKL PLARSKPHRP VLEVVLPVAT
301: AALLVAAGAV VFLSVRRHIR YAELREDWEV EFGPHRFSYK DLFRATEGFG DKNLLGTGGF GRVYRGVLPR SKLKVAVKKV SHDSKQGMKE FIAEVVSIGR
401: LQHRNLVKLL GYCRRKGELL LVYDYVPNGS LDRYLYGRNG NQQAMAAAPA TLDWSRRFRI IKGIACGLLY LHEEWEKVVI HRDIKASNVL LDDDMNARLG
501: DFGLARLYDH GVDPQTTHVV GTIGYLAPEL ACTGKATPLT DVFAFGVFVL EVACGRRPIK HSEAQQNRLV LFDWVFQHLQ NGSLTDAIDG RLKGDYDVDE
601: ACLALKLGLL CSHPFASARP SMRQVMQYLH GDVSPPELAP THQSFEALAL MQEDGFDPYI MSYPSSTATA SIGTVSATMS QGR

Best Arabidopsis Sequence Match ( AT3G53810.1 )
(BLAST)

001: MFVKLKLIFF FFLLCQIMIS SSQNLNFTYN GFHPPLTDIS LQGLATVTPN GLLKLTNTSV QKTGHAFCTE RIRFKDSQNG NVSSFSTTFV FAIHSQIPTL
101: SGHGIAFVVA PTLGLPFALP SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD HDKFQNLSLI SRKRIQVWID
201: YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS
301: LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL DADFNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL
601: CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK GFTGGSSIAD SLLSGGR

Arabidopsis Description

LECRK42L-type lectin-domain containing receptor kinase IV.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M345]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.