Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G335400.1 | Wheat | plasma membrane | 95.13 | 94.43 |
| TraesCS6A01G352900.1 | Wheat | plasma membrane | 93.94 | 93.67 |
| Zm00001d053322_P001 | Maize | plasma membrane | 65.58 | 65.01 |
| TraesCS3B01G119200.1 | Wheat | plasma membrane | 37.67 | 62.65 |
| TraesCS2B01G150100.1 | Wheat | cytosol | 58.49 | 61.97 |
| TraesCS3B01G364400.1 | Wheat | plasma membrane | 60.71 | 61.25 |
| TraesCS3B01G338800.1 | Wheat | vacuole | 60.56 | 61.19 |
| TraesCS6B01G160500.1 | Wheat | plasma membrane | 60.86 | 60.59 |
| TraesCS1B01G062300.1 | Wheat | plasma membrane | 59.23 | 60.12 |
| TraesCS5B01G449800.1 | Wheat | plasma membrane | 62.04 | 59.74 |
| TraesCS3B01G364500.1 | Wheat | vacuole | 58.35 | 58.96 |
| TraesCS5B01G410900.1 | Wheat | plasma membrane | 59.08 | 58.74 |
| TraesCS3B01G119300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 45.49 | 58.22 |
| TraesCS3B01G119600.1 | Wheat | plasma membrane | 57.75 | 58.18 |
| TraesCS3B01G119500.1 | Wheat | plasma membrane | 57.46 | 57.8 |
| TraesCS2B01G388800.1 | Wheat | plasma membrane | 57.02 | 57.02 |
| TraesCS6B01G160600.1 | Wheat | plasma membrane | 57.31 | 56.56 |
| TraesCS1B01G062200.1 | Wheat | plasma membrane | 55.24 | 56.41 |
| TraesCS5B01G449900.1 | Wheat | plasma membrane | 40.62 | 56.35 |
| TraesCS2B01G221100.1 | Wheat | plasma membrane | 56.43 | 56.26 |
| TraesCS3B01G338900.1 | Wheat | plasma membrane | 56.43 | 56.18 |
| TraesCS2B01G158800.1 | Wheat | plasma membrane | 53.03 | 56.09 |
| CDX91325 | Canola | cytosol, mitochondrion | 21.57 | 55.3 |
| TraesCS2B01G221200.1 | Wheat | plasma membrane | 54.21 | 54.86 |
| TraesCS2B01G106200.1 | Wheat | plasma membrane | 53.77 | 53.14 |
| TraesCS2B01G158700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 53.03 | 52.95 |
| TraesCS6B01G265000.1 | Wheat | plasma membrane | 52.14 | 52.92 |
| VIT_08s0007g00810.t01 | Wine grape | plasma membrane | 53.03 | 52.79 |
| AT2G37710.1 | Thale cress | plasma membrane | 52.44 | 52.59 |
| KRH49145 | Soybean | plasma membrane | 50.96 | 51.72 |
| CDX91384 | Canola | plasma membrane | 51.4 | 51.71 |
| Bra005168.1-P | Field mustard | plasma membrane | 51.11 | 51.41 |
| KRH00016 | Soybean | plasma membrane | 50.52 | 51.27 |
| CDY21254 | Canola | plasma membrane | 49.04 | 51.0 |
| CDY65835 | Canola | plasma membrane | 49.48 | 50.83 |
| PGSC0003DMT400022983 | Potato | plasma membrane | 49.63 | 50.53 |
| AT3G53810.1 | Thale cress | plasma membrane | 50.52 | 50.52 |
| Bra035326.1-P | Field mustard | plasma membrane | 49.63 | 50.07 |
| Solyc09g011990.1.1 | Tomato | plasma membrane | 49.34 | 50.0 |
| CDY02414 | Canola | plasma membrane | 43.43 | 49.83 |
| AT4G02420.1 | Thale cress | plasma membrane | 48.89 | 49.48 |
| Bra018553.1-P | Field mustard | plasma membrane | 48.3 | 49.03 |
| AT4G02410.1 | Thale cress | plasma membrane | 48.74 | 48.96 |
| PGSC0003DMT400022743 | Potato | plasma membrane | 48.15 | 48.8 |
| Solyc09g012000.1.1 | Tomato | plasma membrane | 48.15 | 48.73 |
| CDY55369 | Canola | plasma membrane | 48.15 | 48.66 |
| CDX90939 | Canola | plasma membrane | 47.42 | 48.56 |
| PGSC0003DMT400052365 | Potato | plasma membrane | 47.71 | 48.5 |
| Bra000881.1-P | Field mustard | plasma membrane | 48.15 | 48.3 |
| TraesCS6B01G385500.1 | Wheat | plasma membrane | 47.86 | 48.14 |
| Bra000880.1-P | Field mustard | plasma membrane | 44.76 | 44.62 |
| TraesCS5B01G084800.1 | Wheat | plasma membrane | 44.61 | 43.58 |
| TraesCS4B01G289100.1 | Wheat | plasma membrane | 43.13 | 42.94 |
| Solyc09g011060.2.1 | Tomato | plasma membrane | 49.19 | 40.02 |
| GSMUA_Achr9P09920_001 | Banana | plasma membrane | 41.8 | 29.85 |
| GSMUA_Achr9P10000_001 | Banana | cytosol | 40.47 | 14.29 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.19 | Gene3D:2.60.120.200 | Gene3D:3.30.200.20 | InterPro:ConA-like_dom_sf | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0030246 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | InterPro:Legume_lectin_dom | PFAM:PF00069 |
| PFAM:PF00139 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27007 | PANTHER:PTHR27007:SF28 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF49899 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6B01G385600 | EnsemblPlants:TraesCS6B01G385600.1 | TIGR:cd06899 | TIGR:cd14066 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:660267290..660269323
Molecular Weight (calculated)
75337.6 Da
IEP (calculated)
6.865
GRAVY (calculated)
-0.097
Length
677 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSMKLASFL LLKLLLLSLG LSMAPPFLAG DEHQFSYSGF SNTNLTLDGA ASITPNGLLM LTNGTSRSMG RAFYPDPLRF RNLSDGAVQS FSASFVFAMV
101: SIYKDLSSNG IAMFIAPSKN LSAAMRMQYL GLLSNQNDGN QTNHIFAVEL DTFQNWELQD MNDNHVGIDV NSLRSIQSHD AGFYHDKNGT FQSLSLDSQE
201: VMQVWVDYHG EKMQIDATMA PLGMDKPTRP IVSANYNLSS VLTDVAYIGF SSAEGKITKH YVLGWSFGMN SPAPAINLSM LPKLPPGPRT KGGRRRLQVL
301: EIILPLATAA LILSVAAVVS LLVRRHLRYA EVRDDWEVEY GPHRFSYKDL FRATEGFDNK NLLGTGGFGR VYRGELSRSK LMIAVKRVSH HSRQGMKEFI
401: AEIVSIGRLQ NPNLVHLLGY CRRRGELLLV YEYMPKGSLD KYLYGEVDNS TLSWDQRIWI IRGIASALIY LHEEWEKVVV HRDIKASNVL LDDELNARLG
501: DFGLARLYDH GVEQETTRVV GTIGYIAPEL ARTGKGTPLT DVFAFGVFIL ELTCGQRPIM QSTQDEQVML VDWALEHVQQ GSLDDAIDIR LKGQYNVSEA
601: HLALKLGLLC SHPFACARPS MRQVIQYLDG HIEPPELPAH QSFQALALMQ NEGFDSYIMS YRSSTSVGTI SSISGGR
101: SIYKDLSSNG IAMFIAPSKN LSAAMRMQYL GLLSNQNDGN QTNHIFAVEL DTFQNWELQD MNDNHVGIDV NSLRSIQSHD AGFYHDKNGT FQSLSLDSQE
201: VMQVWVDYHG EKMQIDATMA PLGMDKPTRP IVSANYNLSS VLTDVAYIGF SSAEGKITKH YVLGWSFGMN SPAPAINLSM LPKLPPGPRT KGGRRRLQVL
301: EIILPLATAA LILSVAAVVS LLVRRHLRYA EVRDDWEVEY GPHRFSYKDL FRATEGFDNK NLLGTGGFGR VYRGELSRSK LMIAVKRVSH HSRQGMKEFI
401: AEIVSIGRLQ NPNLVHLLGY CRRRGELLLV YEYMPKGSLD KYLYGEVDNS TLSWDQRIWI IRGIASALIY LHEEWEKVVV HRDIKASNVL LDDELNARLG
501: DFGLARLYDH GVEQETTRVV GTIGYIAPEL ARTGKGTPLT DVFAFGVFIL ELTCGQRPIM QSTQDEQVML VDWALEHVQQ GSLDDAIDIR LKGQYNVSEA
601: HLALKLGLLC SHPFACARPS MRQVIQYLDG HIEPPELPAH QSFQALALMQ NEGFDSYIMS YRSSTSVGTI SSISGGR
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.