Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G452900.1 | Wheat | mitochondrion, plasma membrane, plastid | 91.19 | 62.24 |
| TraesCS3B01G119300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 45.7 | 42.16 |
| TraesCS1B01G062200.1 | Wheat | plasma membrane | 57.17 | 42.08 |
| TraesCS5B01G410900.1 | Wheat | plasma membrane | 58.61 | 42.0 |
| TraesCS1B01G062300.1 | Wheat | plasma membrane | 57.38 | 41.98 |
| TraesCS3B01G119500.1 | Wheat | plasma membrane | 57.58 | 41.75 |
| TraesCS3B01G338900.1 | Wheat | plasma membrane | 57.99 | 41.62 |
| TraesCS3B01G364400.1 | Wheat | plasma membrane | 56.35 | 40.98 |
| TraesCS3B01G338800.1 | Wheat | vacuole | 56.15 | 40.9 |
| TraesCS6B01G160600.1 | Wheat | plasma membrane | 57.38 | 40.82 |
| TraesCS6B01G160500.1 | Wheat | plasma membrane | 56.76 | 40.74 |
| TraesCS6B01G385600.1 | Wheat | plasma membrane | 56.35 | 40.62 |
| TraesCS2B01G158800.1 | Wheat | plasma membrane | 53.07 | 40.47 |
| TraesCS3B01G364500.1 | Wheat | vacuole | 55.53 | 40.45 |
| TraesCS5B01G449800.1 | Wheat | plasma membrane | 57.58 | 39.97 |
| TraesCS2B01G221100.1 | Wheat | plasma membrane | 55.33 | 39.76 |
| TraesCS3B01G119600.1 | Wheat | plasma membrane | 54.71 | 39.73 |
| TraesCS6B01G265000.1 | Wheat | plasma membrane | 53.69 | 39.28 |
| TraesCS2B01G150100.1 | Wheat | cytosol | 51.02 | 38.97 |
| TraesCS2B01G388800.1 | Wheat | plasma membrane | 52.87 | 38.11 |
| TraesCS2B01G106200.1 | Wheat | plasma membrane | 52.46 | 37.37 |
| TraesCS2B01G221200.1 | Wheat | plasma membrane | 50.82 | 37.07 |
| KRH49145 | Soybean | plasma membrane | 50.2 | 36.73 |
| KRH00016 | Soybean | plasma membrane | 49.8 | 36.43 |
| VIT_08s0007g00810.t01 | Wine grape | plasma membrane | 50.2 | 36.03 |
| TraesCS2B01G158700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 50.0 | 35.99 |
| PGSC0003DMT400052365 | Potato | plasma membrane | 48.16 | 35.29 |
| Solyc09g011990.1.1 | Tomato | plasma membrane | 48.16 | 35.18 |
| AT2G37710.1 | Thale cress | plasma membrane | 48.16 | 34.81 |
| CDX91384 | Canola | plasma membrane | 47.13 | 34.18 |
| PGSC0003DMT400022983 | Potato | plasma membrane | 46.52 | 34.14 |
| CDY55369 | Canola | plasma membrane | 46.72 | 34.03 |
| Bra005168.1-P | Field mustard | plasma membrane | 46.93 | 34.03 |
| PGSC0003DMT400022743 | Potato | plasma membrane | 46.52 | 33.98 |
| Bra018553.1-P | Field mustard | plasma membrane | 46.31 | 33.88 |
| Solyc09g012000.1.1 | Tomato | plasma membrane | 46.11 | 33.63 |
| AT4G02420.1 | Thale cress | plasma membrane | 46.11 | 33.63 |
| CDY02414 | Canola | plasma membrane | 40.57 | 33.56 |
| CDX90939 | Canola | plasma membrane | 45.29 | 33.43 |
| Bra000881.1-P | Field mustard | plasma membrane | 46.11 | 33.33 |
| CDY21254 | Canola | plasma membrane | 44.26 | 33.18 |
| AT3G53810.1 | Thale cress | plasma membrane | 45.9 | 33.09 |
| Bra035326.1-P | Field mustard | plasma membrane | 44.88 | 32.64 |
| AT4G02410.1 | Thale cress | plasma membrane | 44.88 | 32.49 |
| CDY65835 | Canola | plasma membrane | 43.24 | 32.02 |
| Bra000880.1-P | Field mustard | plasma membrane | 43.65 | 31.37 |
| TraesCS6B01G385500.1 | Wheat | plasma membrane | 42.62 | 30.91 |
| TraesCS3B01G119200.1 | Wheat | plasma membrane | 25.61 | 30.71 |
| Solyc09g011060.2.1 | Tomato | plasma membrane | 47.34 | 27.76 |
| TraesCS5B01G084800.1 | Wheat | plasma membrane | 39.34 | 27.71 |
| TraesCS4B01G289100.1 | Wheat | plasma membrane | 37.5 | 26.91 |
| GSMUA_Achr9P09920_001 | Banana | plasma membrane | 39.55 | 20.36 |
| CDX91325 | Canola | cytosol, mitochondrion | 8.81 | 16.29 |
| GSMUA_Achr9P10000_001 | Banana | cytosol | 45.29 | 11.53 |
Protein Annotations
| MapMan:18.4.1.19 | Gene3D:2.60.120.200 | Gene3D:3.30.200.20 | InterPro:ConA-like_dom_sf | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004713 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0030246 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | InterPro:Legume_lectin_dom | PFAM:PF00139 |
| PFAM:PF07714 | ScanProsite:PS00107 | PFscan:PS50011 | PANTHER:PTHR27007 | PANTHER:PTHR27007:SF28 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SMART:SM00219 | SUPFAM:SSF49899 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | SignalP:SignalP-noTM |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5B01G449900 | EnsemblPlants:TraesCS5B01G449900.1 | InterPro:Tyr_kinase_cat_dom | TIGR:cd06899 | SEG:seg |
Description
No Description!
Coordinates
chr5B:+:622069028..622070494
Molecular Weight (calculated)
54064.2 Da
IEP (calculated)
9.538
GRAVY (calculated)
-0.025
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGVSFLLHA LLFLSLGLAP LCSRGVEDQF VYSGFTGTNL ILDGAAVVTA DGLLKVTNGT VNLYGHEFHP TPLRFRKSSN GRVRSFSASF VFGISSVYHE
101: TSVDGMAFFI SPRNHFSNVL ANQFLGLLND KNNGNSSNHI FAVEIDTFQN TELKDINDNQ VGIDINSVRS VQSRPAGFYD DMGIFSNLSL NSGEAMQVWV
201: DYDEGATQIS VTIAPLRVVV KPAKPLVSAT YDLSQVLVDP AYVGFSSSTG PISTQYIVLG WSLSMDGPAP VIDTARLPKL PQLVLKNTQS RVLKIVLPIA
301: TAALVLAMGT AIVLIIRRRL RYTELREDWE AEFGPHRFSY KDLFLATEGF KNKHLLGTGG FGKVYKGVLP TSKLDVAVKK LSHELRQGMK EFVSEVVSIG
401: RLRHRNLVQL LGYCRRNHEL LLVYDYMPNS SLDRYLYCDE EGKRPTLGWD QMRSSKVLHV ACSTCTRSGR KLSSIGTSRR AMCSWTVR
101: TSVDGMAFFI SPRNHFSNVL ANQFLGLLND KNNGNSSNHI FAVEIDTFQN TELKDINDNQ VGIDINSVRS VQSRPAGFYD DMGIFSNLSL NSGEAMQVWV
201: DYDEGATQIS VTIAPLRVVV KPAKPLVSAT YDLSQVLVDP AYVGFSSSTG PISTQYIVLG WSLSMDGPAP VIDTARLPKL PQLVLKNTQS RVLKIVLPIA
301: TAALVLAMGT AIVLIIRRRL RYTELREDWE AEFGPHRFSY KDLFLATEGF KNKHLLGTGG FGKVYKGVLP TSKLDVAVKK LSHELRQGMK EFVSEVVSIG
401: RLRHRNLVQL LGYCRRNHEL LLVYDYMPNS SLDRYLYCDE EGKRPTLGWD QMRSSKVLHV ACSTCTRSGR KLSSIGTSRR AMCSWTVR
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.