Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0743500-02 | Rice | nucleus | 65.78 | 79.87 |
| KXG37587 | Sorghum | cytosol | 65.24 | 79.22 |
| Zm00001d033980_P001 | Maize | cytosol | 62.03 | 73.89 |
| TraesCS1A01G308800.1 | Wheat | cytosol | 45.99 | 65.65 |
| PGSC0003DMT400042062 | Potato | cytosol | 50.27 | 62.67 |
| KRG92449 | Soybean | cytosol | 50.27 | 62.67 |
| KRH34350 | Soybean | cytosol | 49.73 | 62.0 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 49.2 | 61.74 |
| Solyc06g053930.2.1 | Tomato | cytosol | 49.2 | 61.74 |
| KRH69070 | Soybean | cytosol | 48.66 | 60.67 |
| KRH31638 | Soybean | cytosol | 48.13 | 60.0 |
| Bra023786.1-P | Field mustard | cytosol | 49.2 | 58.97 |
| CDY34215 | Canola | cytosol | 49.2 | 58.97 |
| Bra001892.1-P | Field mustard | cytosol | 48.13 | 58.44 |
| CDX92965 | Canola | cytosol | 48.13 | 58.44 |
| AT4G14640.1 | Thale cress | cytosol | 47.06 | 58.28 |
| Bra033898.1-P | Field mustard | cytosol | 48.13 | 58.06 |
| CDY10686 | Canola | cytosol | 47.59 | 57.42 |
| CDY06478 | Canola | cytosol | 45.99 | 56.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 44.38 | 56.46 |
| TraesCS3A01G184500.1 | Wheat | cytosol | 49.2 | 56.1 |
| KRH68729 | Soybean | cytosol | 44.38 | 55.7 |
| KRG96966 | Soybean | cytosol | 43.85 | 55.03 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 44.92 | 54.9 |
| Bra039723.1-P | Field mustard | cytosol | 44.92 | 54.9 |
| PGSC0003DMT400034833 | Potato | cytosol | 44.92 | 54.9 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 43.32 | 54.73 |
| TraesCS3A01G191900.1 | Wheat | cytosol | 46.52 | 54.72 |
| AT3G22930.1 | Thale cress | cytosol | 49.73 | 53.76 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 42.78 | 53.69 |
| Solyc03g005240.1.1 | Tomato | cytosol | 43.85 | 53.59 |
| KRH67274 | Soybean | cytosol | 41.71 | 52.7 |
| KRH34082 | Soybean | cytosol | 41.18 | 51.68 |
| CDY40824 | Canola | cytosol | 49.2 | 51.11 |
| Solyc01g105630.2.1 | Tomato | cytosol | 40.11 | 51.02 |
| KRG95596 | Soybean | cytosol | 40.11 | 50.68 |
| PGSC0003DMT400083727 | Potato | cytosol | 39.57 | 50.34 |
| KRG92667 | Soybean | cytosol | 40.11 | 50.34 |
| TraesCS5A01G057100.1 | Wheat | cytosol | 43.85 | 49.7 |
| TraesCS5A01G057200.1 | Wheat | cytosol | 43.32 | 49.69 |
| CDX94883 | Canola | cytosol | 29.41 | 49.55 |
| TraesCS3A01G335000.1 | Wheat | cytosol | 47.59 | 48.9 |
| CDY10325 | Canola | cytosol | 29.41 | 48.67 |
| KRH71363 | Soybean | cytosol | 37.43 | 46.98 |
| TraesCS5A01G139700.1 | Wheat | cytosol | 42.78 | 44.44 |
| KRG94637 | Soybean | cytosol | 26.74 | 43.86 |
| KRH32074 | Soybean | cytosol | 33.16 | 41.61 |
| TraesCS7A01G316100.1 | Wheat | cytosol, unclear | 25.67 | 32.43 |
| TraesCS2A01G166500.1 | Wheat | cytosol, mitochondrion | 28.34 | 31.55 |
| TraesCS1A01G308700.1 | Wheat | cytosol | 24.6 | 30.26 |
| TraesCS1A01G416100.1 | Wheat | cytosol | 27.81 | 30.23 |
| TraesCS1A01G193700.1 | Wheat | cytosol | 26.74 | 25.91 |
| TraesCS3A01G216300.1 | Wheat | cytosol | 27.81 | 20.39 |
| TraesCS5A01G382700.1 | Wheat | nucleus | 3.21 | 4.38 |
| KXG37588 | Sorghum | mitochondrion, nucleus | 3.21 | 4.38 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G382800.2 | EnsemblPlantsGene:TraesCS5A01G382800 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF198 |
| PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| TIGR:cd00051 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:580800823..580801653
Molecular Weight (calculated)
21438.9 Da
IEP (calculated)
4.412
GRAVY (calculated)
-0.186
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVVILLVTH FSTRIHLTST PVYHILCLLK PLSFAKIFDR ALHVVLSWPL RDREFRIRCI SLEELAAVTR SLGLDPTNQE LNDMMREVDM DGNGTIDFQE
101: FLSLIARKMQ DGDGDEELKE AFEVLDKDRN GFISPVELRT VMINLGEKMT DEEVEQMIRE ADTDGDGQVN YDEFVLMMKN AERKITG
101: FLSLIARKMQ DGDGDEELKE AFEVLDKDRN GFISPVELRT VMINLGEKMT DEEVEQMIRE ADTDGDGQVN YDEFVLMMKN AERKITG
001: MADQLTDEQI SEFKEAFSLF DKDGDDSISD SGDSCGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF
101: RVFDKDQNGF ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
101: RVFDKDQNGF ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
Arabidopsis Description
CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.