Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G239600.1 | Wheat | cytosol | 96.47 | 96.47 |
| TraesCS6B01G284900.1 | Wheat | cytosol | 95.85 | 95.26 |
| HORVU6Hr1G061220.6 | Barley | cytosol | 92.74 | 92.16 |
| Zm00001d017418_P001 | Maize | cytosol, mitochondrion | 73.65 | 79.6 |
| Os02t0646500-01 | Rice | plasma membrane | 77.8 | 77.0 |
| EES05817 | Sorghum | cytosol | 77.39 | 76.75 |
| TraesCS6D01G222300.1 | Wheat | cytosol | 76.76 | 76.45 |
| TraesCS2D01G386700.1 | Wheat | cytosol, plastid | 67.84 | 61.7 |
| GSMUA_Achr8P11740_001 | Banana | cytosol | 56.64 | 57.72 |
| PGSC0003DMT400009314 | Potato | cytosol | 57.05 | 56.24 |
| Solyc02g084640.2.1 | Tomato | cytosol | 56.64 | 55.83 |
| VIT_04s0023g02810.t01 | Wine grape | cytosol | 56.64 | 55.38 |
| KRH69828 | Soybean | cytosol | 54.77 | 54.43 |
| CDX75566 | Canola | cytosol | 46.27 | 51.26 |
| Bra011674.1-P | Field mustard | cytosol | 50.83 | 50.94 |
| CDX77447 | Canola | cytosol | 50.41 | 50.52 |
| CDX72584 | Canola | cytosol | 50.62 | 50.41 |
| CDY59717 | Canola | cytosol | 50.41 | 50.21 |
| Bra017753.1-P | Field mustard | cytosol | 50.21 | 50.0 |
| CDX69216 | Canola | cytosol | 49.79 | 49.9 |
| KRH08130 | Soybean | cytosol | 54.77 | 49.81 |
| CDY35463 | Canola | cytosol | 50.41 | 49.8 |
| AT4G36250.1 | Thale cress | cytosol | 50.0 | 49.79 |
| CDY24790 | Canola | cytosol | 50.0 | 49.39 |
| Bra010553.1-P | Field mustard | cytosol | 47.1 | 48.61 |
| TraesCS5D01G127300.2 | Wheat | cytosol | 45.64 | 45.93 |
| TraesCS4D01G094500.1 | Wheat | cytosol, golgi | 45.44 | 45.53 |
| CDY20864 | Canola | extracellular | 8.92 | 37.72 |
| CDY21568 | Canola | cytosol | 7.26 | 36.08 |
Protein Annotations
| Gene3D:3.40.309.10 | Gene3D:3.40.605.10 | MapMan:50.1.2 | InterPro:Ald_DH/histidinol_DH | InterPro:Ald_DH_C | InterPro:Ald_DH_N |
| InterPro:Aldehyde_DH_NAD(P) | InterPro:Aldehyde_DH_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006081 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016620 | GO:GO:0055114 | InterPro:IPR016162 |
| InterPro:IPR016163 | PFAM:PF00171 | PIRSF:PIRSF036492 | PANTHER:PTHR43570 | PANTHER:PTHR43570:SF17 | SUPFAM:SSF53720 |
| EnsemblPlantsGene:TraesCS6D01G222000 | EnsemblPlants:TraesCS6D01G222000.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6D:-:312819684..312827151
Molecular Weight (calculated)
53579.3 Da
IEP (calculated)
7.556
GRAVY (calculated)
0.055
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKPALGLG SLVSSLRVVY KSGRTKDLSW RRSQLNGLIR LLTEKEEEIF DALHDDLGKH RTESFRDEVG VVVKSIKHTL QNLEKWAAPE KAPTPLVSFP
101: ATALVLPEPL GVVLIFSCWN LPLGLALEPL SGALAAGNAV VLKPSELAPA TAAFLAANIP RYLDAEAVKV VLGAAEIGQE LMEHRWDKVL FTGGARVGRI
201: IMTKAAKYLT PVALELGSKC PCIVDWLDSK RDSQVAVNRI IGAKWSTCAG QACIAIDYIL VEEQFAPILI ELLKSTLERL FTKPEDMARI LNERQFNRLC
301: GLLEDHKVSR SIVHGGDVDP KTLSIEPTIL LNPPLDSDVM TEEIFGPLLP IITVKKIEDS IEFVSSRPKP LAIYAFTTSE ALKQRIVRET SSGSVTFNDA
401: IVQYGLESIP FGGVGQSGFG QYHGKYSFEM FSHKKAVFRR SFLLEFMFRY PPWNDDSKLA LLRHVFRYDY VSLFLALLGL RR
101: ATALVLPEPL GVVLIFSCWN LPLGLALEPL SGALAAGNAV VLKPSELAPA TAAFLAANIP RYLDAEAVKV VLGAAEIGQE LMEHRWDKVL FTGGARVGRI
201: IMTKAAKYLT PVALELGSKC PCIVDWLDSK RDSQVAVNRI IGAKWSTCAG QACIAIDYIL VEEQFAPILI ELLKSTLERL FTKPEDMARI LNERQFNRLC
301: GLLEDHKVSR SIVHGGDVDP KTLSIEPTIL LNPPLDSDVM TEEIFGPLLP IITVKKIEDS IEFVSSRPKP LAIYAFTTSE ALKQRIVRET SSGSVTFNDA
401: IVQYGLESIP FGGVGQSGFG QYHGKYSFEM FSHKKAVFRR SFLLEFMFRY PPWNDDSKLA LLRHVFRYDY VSLFLALLGL RR
001: MAAKKVFGSA EASNLVTELR RSFDDGVTRG YEWRVTQLKK LMIICDNHEP EIVAALRDDL GKPELESSVY EVSLLRNSIK LALKQLKNWM APEKAKTSLT
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA
Arabidopsis Description
ALDH3H1Aldehyde dehydrogenase family 3 member H1 [Source:UniProtKB/Swiss-Prot;Acc:Q70DU8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.