CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36250.1	CDX73678	AT3G51920.1	17360592
AT4G36250.1	CDX95314	AT3G51920.1	17360592
AT4G36250.1	CDY23174	AT3G51920.1	17360592
AT4G36250.1	CDY06478	AT4G14640.1	17360592
AT4G36250.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59717	Canola	cytosol	97.31	97.31
CDY24790	Canola	cytosol	93.39	92.62
CDY35463	Canola	cytosol	92.98	92.21
CDX77447	Canola	cytosol	91.32	91.89
CDX69216	Canola	cytosol	91.12	91.68
CDX75566	Canola	cytosol	81.41	90.57
AT4G36250.1	Thale cress	cytosol	85.33	85.33
CDY21568	Canola	cytosol	13.43	67.01
CDY20864	Canola	extracellular	15.5	65.79
PGSC0003DMT400009314	Potato	cytosol	63.64	62.99
VIT_04s0023g02810.t01	Wine grape	cytosol	63.64	62.47
KRH69828	Soybean	cytosol	62.4	62.27
Solyc02g084640.2.1	Tomato	cytosol	61.36	60.74
KRH08130	Soybean	cytosol	62.4	56.98
Zm00001d017418_P001	Maize	cytosol, mitochondrion	49.38	53.59
GSMUA_Achr8P11740_001	Banana	cytosol	51.86	53.07
EES05817	Sorghum	cytosol	52.69	52.47
OQU82042	Sorghum	cytosol	53.51	52.22
HORVU6Hr1G061220.6	Barley	cytosol	52.27	52.16
TraesCS6A01G240000.1	Wheat	cytosol	47.93	51.1
TraesCSU01G066700.2	Wheat	cytosol	50.21	51.05
TraesCS6D01G222300.1	Wheat	cytosol	51.03	51.03
Os02t0647900-01	Rice	cytosol	51.65	50.92
TraesCS6A01G239600.1	Wheat	cytosol	50.62	50.83
TraesCS6B01G284600.1	Wheat	cytosol	50.83	50.83
TraesCS6B01G284900.1	Wheat	cytosol	50.83	50.72
TraesCS6D01G222000.1	Wheat	cytosol	50.41	50.62
TraesCS2A01G388900.1	Wheat	cytosol	51.45	50.61
Os02t0646500-01	Rice	plasma membrane	50.83	50.51
TraesCS2B01G406900.1	Wheat	cytosol	51.24	50.41
Zm00001d025958_P001	Maize	cytosol	52.69	50.2
CDY66167	Canola	endoplasmic reticulum, mitochondrion, nucleus	16.32	49.38
Os04t0540600-01	Rice	cytosol	50.83	49.3
TraesCS2D01G386700.1	Wheat	cytosol, plastid	51.65	47.17
CDY14976	Canola	cytosol	25.83	45.79
CDY36018	Canola	cytosol	45.25	45.44
CDY36336	Canola	cytosol	45.04	45.23
HORVU2Hr1G092540.1	Barley	extracellular, vacuole	8.06	43.82
HORVU6Hr1G061270.3	Barley	golgi, mitochondrion, peroxisome	51.45	43.23
CDY25655	Canola	cytosol	34.71	43.19
HORVU2Hr1G092530.1	Barley	peroxisome	41.12	40.61
CDX75414	Canola	mitochondrion, plastid	44.01	38.31
CDX69039	Canola	mitochondrion	43.39	38.25
CDY14975	Canola	cytosol, plastid	7.44	36.73
HORVU4Hr1G041570.1	Barley	plastid	19.42	35.07

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	GO:A0A078C8U6	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDX72584	ProteinID:CDX72584	ProteinID:CDX72584.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00100125001	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	PIRSF:PIRSF036492	PANTHER:PTHR43570	PANTHER:PTHR43570:SF17	SUPFAM:SSF53720	UniParc:UPI0004EE09B1

Description

BnaC07g46060D

Coordinates

chrLK031796:+:1986755..1989482

Molecular Weight (calculated)

53924.9 Da

IEP (calculated)

8.258

GRAVY (calculated)

0.004

Length

484 amino acids

Sequence
(BLAST)

001: MEAMKETVDL SLREMRETFA SGRTRSVKWR KTQLKAIIEM VKDNEEKMCD VLFQDLGKHS TEAFRDELGF VMRSAATALN SLDKWVVPRK SNLPLLFYPA
101: TGKVISEPYG TVLVLSSWNF PISLSLDPMI GAISAGNTVL LKASELSPNA SAFLAKTIPS YLDNKAIKVI EGGPDVATIL LQHQWDKIFF TGSPRIGKII
201: MAAAAEHLTP VTLELGGKCP TIIDHHSVSK DIMSIVKRIS GGKWGSCSGQ ACISVDYVLV EQSFASSLIE MFKPVIKSFF GENPKESGFV ARIVTKKHFQ
301: RLSRLLNDPR VQASIVYGGS MDEEKLYVEP TILLNPPLDS EIMNEEIFGP VLPIITLRDI QESIGFIKSK PKPLAIYAFT KDEKLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GMGRYHGKYS FECFSHEKAI MEGSLAIDLE PRYPPWNNFK LTFIRLAFCE AYFKLVLLML GLKR

Best Arabidopsis Sequence Match ( AT1G44170.1 )
(BLAST)

001: MAAKKVFGSA EASNLVTELR RSFDDGVTRG YEWRVTQLKK LMIICDNHEP EIVAALRDDL GKPELESSVY EVSLLRNSIK LALKQLKNWM APEKAKTSLT
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA

Arabidopsis Description

ALDH3H1Aldehyde dehydrogenase family 3 member H1 [Source:UniProtKB/Swiss-Prot;Acc:Q70DU8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.