CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14976	Canola	cytosol	51.93	73.99
Bra032205.1-P	Field mustard	cytosol	91.26	73.65
CDY36336	Canola	cytosol	84.32	68.05
CDY36018	Canola	cytosol	83.8	67.63
AT1G44170.2	Thale cress	cytosol	78.66	63.22
PGSC0003DMT400045297	Potato	cytosol	62.98	51.69
Solyc06g060250.2.1	Tomato	cytosol, nucleus, unclear	62.72	51.48
KRH16375	Soybean	endoplasmic reticulum, extracellular	63.5	49.8
KRH64661	Soybean	cytosol	62.47	49.8
KRH53251	Soybean	cytosol	62.21	49.29
KRH17967	Soybean	endoplasmic reticulum	62.72	49.19
Zm00001d000116_P001	Maize	cytosol	57.58	46.86
Zm00001d004731_P001	Maize	cytosol	58.35	46.52
GSMUA_Achr10P...	Banana	cytosol	57.58	46.28
KXG27931	Sorghum	cytosol	56.81	46.23
GSMUA_Achr8P30130_001	Banana	mitochondrion, plastid	56.56	46.22
Os12t0178000-01	Rice	endoplasmic reticulum	43.44	46.05
GSMUA_Achr6P17700_001	Banana	cytosol	57.33	45.79
Os11t0186200-01	Rice	cytosol, nucleus, plasma membrane, plastid	56.56	45.64
GSMUA_Achr11P...	Banana	cytosol	57.84	45.64
TraesCS4B01G098300.1	Wheat	cytosol, golgi	56.04	45.32
TraesCS4A01G219900.1	Wheat	cytosol, golgi, unclear	55.78	45.11
TraesCS5A01G113200.1	Wheat	cytosol	55.27	44.79
TraesCS4D01G094500.1	Wheat	cytosol, golgi	55.27	44.7
TraesCS5B01G120100.1	Wheat	cytosol	55.01	44.58
TraesCS5D01G127300.2	Wheat	cytosol	54.5	44.26
HORVU4Hr1G017450.1	Barley	cytosol	55.01	43.76
EES15756	Sorghum	cytosol	54.76	43.74
Zm00001d023580_P001	Maize	cytosol	55.01	43.58
CDX69039	Canola	mitochondrion	59.13	41.89
CDX75414	Canola	mitochondrion, plastid	59.38	41.55
VIT_18s0001g02440.t01	Wine grape	endoplasmic reticulum, golgi	58.61	41.45
HORVU5Hr1G037200.7	Barley	mitochondrion	48.59	38.97
CDY20864	Canola	extracellular	10.8	36.84
CDX75566	Canola	cytosol	40.62	36.32
CDY21568	Canola	cytosol	9.0	36.08
CDX77447	Canola	cytosol	43.7	35.34
CDX69216	Canola	cytosol	43.19	34.93
CDX72584	Canola	cytosol	43.19	34.71
CDY59717	Canola	cytosol	43.19	34.71
CDY35463	Canola	cytosol	43.44	34.63
CDY24790	Canola	cytosol	42.93	34.22
CDY66167	Canola	endoplasmic reticulum, mitochondrion, nucleus	8.23	20.0
CDY14975	Canola	cytosol, plastid	0.51	2.04

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	GO:A0A078GGT0	UniProt:A0A078GGT0	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDY25655	ProteinID:CDY25655
ProteinID:CDY25655.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00032956001	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00687	PANTHER:PTHR43570	PANTHER:PTHR43570:SF10	SUPFAM:SSF53720	UniParc:UPI0004EED81F
SEG:seg	:	:	:	:	:

Description

BnaC05g25340DBnaC05g25340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGT0]

Coordinates

chrLK032178:-:57382..59873

Molecular Weight (calculated)

39933.6 Da

IEP (calculated)

5.308

GRAVY (calculated)

0.042

Length

389 amino acids

Sequence
(BLAST)

001: MVKVFQAADA TDLVTELRRS FDDGVTRGYE WRVTQLKKLL LICDNHEPEI VSALHDDLGK PELESSVYEV ALLRNSINLA VQQLKDWMAP DKAKTSLTTF
101: PASAEIVYEP LGVVLVISAW NYPFLLSIDP VIGAISAGNA VVLKPSELAP ASSSLLAKLL EQYLDSSAVR VVEGAVTETT LLLEQKWDKI FYTGSSRIGR
201: IIMMAAAKHL TPVVLELGGK SPVVIDSDTN LKITAKRIIA GKWGCNNGQA CISPDYILTT KEFSPKVIDA LKQELEAFYG KNPMESKDMS RIVNSNHFDR
301: LSKMLEEKEV SDKIVYGGQK NRDKLKIAPT ILVDVPLDSQ IMSEEIFGPL LPIITVRTIC XXXXXXXXXX XXXXXXXXXX XXXXXXXLS

Best Arabidopsis Sequence Match ( AT1G44170.2 )
(BLAST)

001: MAAKKVFGSA EASNLVTELR RSFDDGVTRG YEWRVTQLKK LMIICDNHEP EIVAALRDDL GKPELESSVY EVSLLRNSIK LALKQLKNWM APEKAKTSLT
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA

Arabidopsis Description

ALDH3H1Aldehyde dehydrogenase family 3 member H1 [Source:UniProtKB/Swiss-Prot;Acc:Q70DU8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.