CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023580_P001	Maize	cytosol	84.19	83.5
Os12t0178000-01	Rice	endoplasmic reticulum	57.91	76.84
TraesCS5D01G127300.2	Wheat	cytosol	70.43	71.61
TraesCS5B01G120100.1	Wheat	cytosol	70.23	71.25
TraesCS5A01G113200.1	Wheat	cytosol	70.23	71.25
GSMUA_Achr8P30130_001	Banana	mitochondrion, plastid	65.91	67.44
KXG27931	Sorghum	cytosol	65.5	66.74
GSMUA_Achr10P...	Banana	cytosol	65.91	66.32
HORVU5Hr1G037200.7	Barley	mitochondrion	65.91	66.19
GSMUA_Achr11P...	Banana	cytosol	66.12	65.31
GSMUA_Achr6P17700_001	Banana	cytosol	64.68	64.68
PGSC0003DMT400045297	Potato	cytosol	59.55	61.18
Solyc06g060250.2.1	Tomato	cytosol, nucleus, unclear	58.93	60.55
KRH64661	Soybean	cytosol	60.57	60.45
KRH53251	Soybean	cytosol	60.57	60.08
KRH17967	Soybean	endoplasmic reticulum	60.57	59.48
KRH16375	Soybean	endoplasmic reticulum, extracellular	60.57	59.48
CDY66167	Canola	endoplasmic reticulum, mitochondrion, nucleus	19.1	58.12
AT1G44170.2	Thale cress	cytosol	57.49	57.85
Bra032205.1-P	Field mustard	cytosol	57.08	57.68
CDY36336	Canola	cytosol	56.88	57.47
CDY36018	Canola	cytosol	56.67	57.26
Bra014022.1-P	Field mustard	cytosol	56.47	57.05
CDY25655	Canola	cytosol	43.74	54.76
VIT_07s0031g02630.t01	Wine grape	plastid	60.78	54.01
CDY14976	Canola	cytosol	30.18	53.85
VIT_18s0001g02440.t01	Wine grape	endoplasmic reticulum, golgi	58.11	51.45
Bra036943.1-P	Field mustard	cytosol	29.57	50.53
KRH40972	Soybean	plastid	55.44	49.91
CDX69039	Canola	mitochondrion	56.06	49.73
AT4G34240.1	Thale cress	plastid	55.85	49.45
Bra011511.1-P	Field mustard	mitochondrion, plastid	55.85	48.92
CDX75414	Canola	mitochondrion, plastid	55.85	48.92
EES05817	Sorghum	cytosol	45.17	45.27
CDY14975	Canola	cytosol, plastid	9.03	44.9
OQU82042	Sorghum	cytosol	45.59	44.76

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	EntrezGene:8079901	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	UniProt:C5YST8	EnsemblPlants:EES15756	ProteinID:EES15756
ProteinID:EES15756.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004030	GO:GO:0006081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	PFAM:PF00171	PIRSF:PIRSF036492	PANTHER:PTHR43570	PANTHER:PTHR43570:SF5	EnsemblPlantsGene:SORBI_3008G057500
SUPFAM:SSF53720	unigene:Sbi.13679	UniParc:UPI0001A87F7B	RefSeq:XP_002441918.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:5994822..6001133

Molecular Weight (calculated)

52428.8 Da

IEP (calculated)

9.866

GRAVY (calculated)

0.093

Length

487 amino acids

Sequence
(BLAST)

001: MDAAVAAAAE ARERVRASFA TGRTRAAAWR EAQLRGLLRM AAEMEDDVCA ALRADLAKPQ TESYVHEISL VTTSCKFALK NLKKWMKPQK VPGGVLTFPS
101: AARVTAEPLG VVLVISAWNY PFLLAIDPVV GAIAAGNAVV LKPSEVAPAT SSLLAELLPR YVDASCVRVV QGGIPETTAL LELTWDKIFY TGNSKVGRIV
201: MSYAAKHLTP VVLELGGKCP VVVDSNVNIH VAAKRIAAGK WGCNSGQACI SPDYIVTTKS LAPKLLESLK KVLRKFYGED PLRSPDLSRI VNSNHFNRLR
301: TLMDDGTVAG KIAFGGQSDE QQLRIAPTLL LDVPLDSAIM KEEIFGPLLP IITVDKISES FAVINSVSKP LAAYLFTNDS RLKQQFERNI SSGGMIFNDT
401: AIHLTNPHLP FGGVGESGMG AYHGAFSFDA FTHRKAVLDR SSFLGEARAR YPPYTPAKLG ILRGVLKGNP LAMVLAAVGY TGGRRRA

Best Arabidopsis Sequence Match ( AT1G44170.2 )
(BLAST)

001: MAAKKVFGSA EASNLVTELR RSFDDGVTRG YEWRVTQLKK LMIICDNHEP EIVAALRDDL GKPELESSVY EVSLLRNSIK LALKQLKNWM APEKAKTSLT
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA

Arabidopsis Description

ALDH3H1Aldehyde dehydrogenase family 3 member H1 [Source:UniProtKB/Swiss-Prot;Acc:Q70DU8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.