Factsheet for TraesCS4A01G219900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, unclear
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G094500.1	Wheat	cytosol, golgi	98.75	98.75
TraesCS4B01G098300.1	Wheat	cytosol, golgi	97.71	97.71
HORVU4Hr1G017450.1	Barley	cytosol	94.59	93.05
Os11t0186200-01	Rice	cytosol, nucleus, plasma membrane, plastid	83.37	83.19
Zm00001d000116_P001	Maize	cytosol	78.17	78.66
KXG27931	Sorghum	cytosol	77.96	78.45
Zm00001d004731_P001	Maize	cytosol	76.51	75.41
GSMUA_Achr8P30130_001	Banana	mitochondrion, plastid	70.69	71.43
TraesCS5A01G113200.1	Wheat	cytosol	68.19	68.33
GSMUA_Achr11P...	Banana	cytosol	69.65	67.95
GSMUA_Achr6P17700_001	Banana	cytosol	67.57	66.74
GSMUA_Achr10P...	Banana	cytosol	65.28	64.88
PGSC0003DMT400045297	Potato	cytosol	63.41	64.35
Solyc06g060250.2.1	Tomato	cytosol, nucleus, unclear	62.99	63.92
KRH53251	Soybean	cytosol	62.16	60.9
KRH16375	Soybean	endoplasmic reticulum, extracellular	62.79	60.89
KRH64661	Soybean	cytosol	61.54	60.66
KRH17967	Soybean	endoplasmic reticulum	61.54	59.68
Bra032205.1-P	Field mustard	cytosol	58.42	58.3
AT1G44170.2	Thale cress	cytosol	58.63	58.26
CDY36336	Canola	cytosol	57.59	57.47
CDY36018	Canola	cytosol	57.59	57.47
Bra014022.1-P	Field mustard	cytosol	57.38	57.26
VIT_07s0031g02630.t01	Wine grape	plastid	64.45	56.57
CDY25655	Canola	cytosol	45.11	55.78
VIT_18s0001g02440.t01	Wine grape	endoplasmic reticulum, golgi	61.54	53.82
CDY66167	Canola	endoplasmic reticulum, mitochondrion, nucleus	17.88	53.75
CDY14976	Canola	cytosol	29.94	52.75
CDX69039	Canola	mitochondrion	60.08	52.64
CDX75414	Canola	mitochondrion, plastid	60.29	52.16
Bra011511.1-P	Field mustard	mitochondrion, plastid	60.29	52.16
AT4G34240.1	Thale cress	plastid	59.04	51.64
KRH40972	Soybean	plastid	57.59	51.2
Bra036943.1-P	Field mustard	cytosol	29.52	49.82
CDY14975	Canola	cytosol, plastid	9.56	46.94
TraesCS2A01G388900.1	Wheat	cytosol	46.99	45.94
TraesCS6A01G239600.1	Wheat	cytosol	45.95	45.85
TraesCS6A01G240000.1	Wheat	cytosol	41.37	43.83

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_N
InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0006081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	PFAM:PF00171	PIRSF:PIRSF036492	PANTHER:PTHR43570	PANTHER:PTHR43570:SF5	SUPFAM:SSF53720
EnsemblPlantsGene:TraesCS4A01G219900	EnsemblPlants:TraesCS4A01G219900.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:522153951..522157524

Molecular Weight (calculated)

52174.5 Da

IEP (calculated)

7.581

GRAVY (calculated)

0.087

Length

481 amino acids

Sequence
(BLAST)

001: MAASAAAVME ELRGSFREGR TRPAEWRTAQ LRALVRMIEE KEDDISDALH ADLAKPRMEA YLHEISLAKG ACMFALKGLK NWMKPDKVPS AITTFPSTAQ
101: IVPEPLGVVL VISAWNYPFL LSIEPVIGAI AAGNAVVLKP SELAPATSSL FAKLLPEYVD SSCIKVVEGG VTETGALLQQ KWDKIFYTGN GNVARVVLAA
201: AAKHLTPVAL ELGGKCPVIV DSNVDLHVAA KRIAVGKWGC NNGQACIAPD YIITTKAFVT ELVDSLKRVL ERFYGEDPLQ SADLSRIVSI SHFERLAKLI
301: EDKEVATKIQ LGGQTDQEQL KIAPTVLVDV PLDTELMTGE IFGPMLPIIT VDKIEESITH INAGAKPLAA YLFTKDKKLQ QDFVSNVSAG GMLVNDVALH
401: LTNPHLPFGG VGDSGTGSYH GKFSFDCFTH RKAVLIRGFG GEANARYPPY TAEKQRILRG LIKGSFFALI LALLGFPREK R

Best Arabidopsis Sequence Match ( AT4G34240.1 )
(BLAST)

001: MTKLLEINHI QTLCFAKGFS PARLNVATSP FRISRRGGGG YCSNACIPYR LKFTCYATLS AVVKEQASDF SGKEAALLVD ELRSNFNSGR TKSYEWRISQ
101: LQNIARMIDE KEKCITEALY QDLSKPELEA FLAEISNTKS SCMLAIKELK NWMAPETVKT SVTTFPSSAQ IVSEPLGVVL VISAWNFPFL LSVEPVIGAI
201: AAGNAVVLKP SEIAPAASSL LAKLFSEYLD NTTIRVIEGG VPETTALLDQ KWDKIFFTGG ARVARIIMAA AARNLTPVVL ELGGKCPALV DSDVNLQVAA
301: RRIIAGKWAC NSGQACIGVD YVITTKDFAS KLIDALKTEL ETFFGQNALE SKDLSRIVNS FHFKRLESML KENGVANKIV HGGRITEDKL KISPTILLDV
401: PEASSMMQEE IFGPLLPIIT VQKIEDGFQV IRSKPKPLAA YLFTNNKELE KQFVQDVSAG GITINDTVLH VTVKDLPFGG VGESGIGAYH GKFSYETFSH
501: KKGVLYRSFS GDADLRYPPY TPKKKMVLKA LLSSNIFAAI LAFFGFSKDS

Arabidopsis Description

ALDH3I1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UV01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.