Factsheet for TraesCS4B01G098300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G094500.1	Wheat	cytosol, golgi	98.13	98.13
TraesCS4A01G219900.1	Wheat	cytosol, golgi, unclear	97.71	97.71
HORVU4Hr1G017450.1	Barley	cytosol	94.18	92.64
Os11t0186200-01	Rice	cytosol, nucleus, plasma membrane, plastid	83.99	83.82
Zm00001d000116_P001	Maize	cytosol	79.0	79.5
KXG27931	Sorghum	cytosol	79.0	79.5
Zm00001d004731_P001	Maize	cytosol	77.75	76.64
GSMUA_Achr8P30130_001	Banana	mitochondrion, plastid	71.31	72.06
GSMUA_Achr11P...	Banana	cytosol	70.69	68.97
TraesCS5B01G120100.1	Wheat	cytosol	68.81	68.96
GSMUA_Achr6P17700_001	Banana	cytosol	68.61	67.76
GSMUA_Achr10P...	Banana	cytosol	66.11	65.7
PGSC0003DMT400045297	Potato	cytosol	64.45	65.4
Solyc06g060250.2.1	Tomato	cytosol, nucleus, unclear	64.03	64.98
KRH16375	Soybean	endoplasmic reticulum, extracellular	63.41	61.49
KRH53251	Soybean	cytosol	62.58	61.3
KRH64661	Soybean	cytosol	61.75	60.86
KRH17967	Soybean	endoplasmic reticulum	62.16	60.28
AT1G44170.2	Thale cress	cytosol	59.46	59.09
Bra032205.1-P	Field mustard	cytosol	58.84	58.71
CDY36336	Canola	cytosol	58.0	57.88
CDY36018	Canola	cytosol	58.0	57.88
Bra014022.1-P	Field mustard	cytosol	57.8	57.68
VIT_07s0031g02630.t01	Wine grape	plastid	65.28	57.3
CDY25655	Canola	cytosol	45.32	56.04
CDY66167	Canola	endoplasmic reticulum, mitochondrion, nucleus	18.09	54.38
VIT_18s0001g02440.t01	Wine grape	endoplasmic reticulum, golgi	61.95	54.18
CDX69039	Canola	mitochondrion	60.71	53.19
CDY14976	Canola	cytosol	30.15	53.11
CDX75414	Canola	mitochondrion, plastid	60.91	52.7
Bra011511.1-P	Field mustard	mitochondrion, plastid	60.91	52.7
AT4G34240.1	Thale cress	plastid	59.67	52.18
KRH40972	Soybean	plastid	58.0	51.57
Bra036943.1-P	Field mustard	cytosol	29.73	50.18
TraesCS2B01G406900.1	Wheat	cytosol	48.02	46.95
CDY14975	Canola	cytosol, plastid	9.56	46.94
TraesCS6B01G284600.1	Wheat	cytosol	45.11	44.83
TraesCS6B01G284900.1	Wheat	cytosol	44.91	44.54

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_N
InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0006081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	PFAM:PF00171	PIRSF:PIRSF036492	PANTHER:PTHR43570	PANTHER:PTHR43570:SF5	SUPFAM:SSF53720
EnsemblPlantsGene:TraesCS4B01G098300	EnsemblPlants:TraesCS4B01G098300.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:+:103524414..103528089

Molecular Weight (calculated)

52069.5 Da

IEP (calculated)

8.133

GRAVY (calculated)

0.110

Length

481 amino acids

Sequence
(BLAST)

001: MAASAAAVME ELRGSFREGR TRPAEWRTAQ LRALVRMIEE KEDDISNALH ADLAKPRMEA YLHEISLAKG ACMFALKGLK NWMKPDKVPS AITTFPSTAQ
101: IVPEPLGVVL VISAWNYPFL LSIEPVIGAI AAGNAVVLKP SEIAPATSSL FAKLLPEYVD SSCIKVVEGG VTETGALLEQ KWDKIFYTGN GNVARVVLAA
201: AAKHLTPVAL ELGGKCPVIV DSNVDLHVAA KRIAVGKWGC NNGQACIAPD YIITTKAFVT ELVDSLKRVL ERFYGEDPLQ SADLSRIVNI SHFGRLTKLI
301: DDKEVATKIQ LGGQTDQEQL KIAPTVLVDV PLDTALMTGE IFGPLLPIIT VDKIEESIAH INAGAKPLAA YLFTKDKKLQ QDFVSNVSAG GMLVNDVALH
401: LTNPHLPFGG VGDSGMGSYH GKFSFDCFTH RKAVLIRGFG GEANARYPPY TAEKQRILRG LIKGSFFALI LALLGFPREK R

Best Arabidopsis Sequence Match ( AT1G44170.2 )
(BLAST)

001: MAAKKVFGSA EASNLVTELR RSFDDGVTRG YEWRVTQLKK LMIICDNHEP EIVAALRDDL GKPELESSVY EVSLLRNSIK LALKQLKNWM APEKAKTSLT
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA

Arabidopsis Description

ALDH3H1Aldehyde dehydrogenase family 3 member H1 [Source:UniProtKB/Swiss-Prot;Acc:Q70DU8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.