Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G239600.1 | Wheat | cytosol | 95.46 | 96.06 |
| TraesCS6D01G222000.1 | Wheat | cytosol | 95.26 | 95.85 |
| HORVU6Hr1G061220.6 | Barley | cytosol | 92.99 | 92.99 |
| Zm00001d017418_P001 | Maize | cytosol, mitochondrion | 73.2 | 79.6 |
| TraesCS6B01G284600.1 | Wheat | cytosol | 77.32 | 77.48 |
| EES05817 | Sorghum | cytosol | 77.53 | 77.37 |
| Os02t0646500-01 | Rice | plasma membrane | 77.32 | 77.0 |
| TraesCS2B01G406900.1 | Wheat | cytosol | 67.01 | 66.06 |
| GSMUA_Achr8P11740_001 | Banana | cytosol | 55.88 | 57.29 |
| PGSC0003DMT400009314 | Potato | cytosol | 56.7 | 56.24 |
| Solyc02g084640.2.1 | Tomato | cytosol | 56.49 | 56.03 |
| VIT_04s0023g02810.t01 | Wine grape | cytosol | 55.46 | 54.56 |
| KRH69828 | Soybean | cytosol | 53.81 | 53.81 |
| CDX75566 | Canola | cytosol | 45.98 | 51.26 |
| Bra011674.1-P | Field mustard | cytosol | 50.52 | 50.94 |
| CDX72584 | Canola | cytosol | 50.72 | 50.83 |
| CDX77447 | Canola | cytosol | 50.1 | 50.52 |
| CDY59717 | Canola | cytosol | 50.31 | 50.41 |
| CDY35463 | Canola | cytosol | 50.31 | 50.0 |
| AT4G36250.1 | Thale cress | cytosol | 49.9 | 50.0 |
| Bra017753.1-P | Field mustard | cytosol | 49.9 | 50.0 |
| CDX69216 | Canola | cytosol | 49.48 | 49.9 |
| CDY24790 | Canola | cytosol | 49.9 | 49.59 |
| KRH08130 | Soybean | cytosol | 53.81 | 49.25 |
| Bra010553.1-P | Field mustard | cytosol | 46.6 | 48.39 |
| TraesCS5B01G120100.1 | Wheat | cytosol | 45.57 | 46.04 |
| TraesCS4B01G098300.1 | Wheat | cytosol, golgi | 44.54 | 44.91 |
| CDY20864 | Canola | extracellular | 8.45 | 35.96 |
| CDY21568 | Canola | cytosol | 6.8 | 34.02 |
Protein Annotations
| Gene3D:3.40.309.10 | Gene3D:3.40.605.10 | MapMan:50.1.2 | InterPro:Ald_DH/histidinol_DH | InterPro:Ald_DH_C | InterPro:Ald_DH_N |
| InterPro:Aldehyde_DH_NAD(P) | InterPro:Aldehyde_DH_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006081 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016620 | GO:GO:0055114 | InterPro:IPR016162 |
| InterPro:IPR016163 | PFAM:PF00171 | PIRSF:PIRSF036492 | PANTHER:PTHR43570 | PANTHER:PTHR43570:SF17 | SUPFAM:SSF53720 |
| EnsemblPlantsGene:TraesCS6B01G284900 | EnsemblPlants:TraesCS6B01G284900.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:+:513686469..513691994
Molecular Weight (calculated)
53809.6 Da
IEP (calculated)
8.211
GRAVY (calculated)
0.035
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTMEEKPAL GLGSLVSSLR VVYKSGRTRE LSWRRSQLKG LIRLLTEKEE EIFDALHDDL GKHRTESFRD EVGVVVKSIK HTLQNLEKWA APEKAPTPLV
101: SFPATALVLP EPLGVVLIFS CWNVPLALAL EPLSGALAAG NAVVVKPSEL APSTAAFLAA NIPRYLDAEA VKVVLGAAEV GQELMEHRWD KVLFTGGARV
201: GRIIMTKAAK HLTPVALELG SKCPCIVDWL DSKRDSQIAV NRIIGAKWST CAGQACIAID YILVEEQFAP ILIELLKSTV ERLITKPEDM ARILNERQFN
301: RLSGLLEDHK VSRSIVHGGN VDPKTLSIEP TILLNPPLDS DVMTEEIFGP LLPIITVKKI EDSIEFVSSR PKPLAIYAFS TSEPLKQRIV KETSSGSVTF
401: NDAIVQYGLE SIPFGGVGQS GFGQYHGKYS FEMFSHKKAV FRRSFLVEFM FRYPPWNDDS KLGMLRHVFR YDYVSLFLAL LGLRR
101: SFPATALVLP EPLGVVLIFS CWNVPLALAL EPLSGALAAG NAVVVKPSEL APSTAAFLAA NIPRYLDAEA VKVVLGAAEV GQELMEHRWD KVLFTGGARV
201: GRIIMTKAAK HLTPVALELG SKCPCIVDWL DSKRDSQIAV NRIIGAKWST CAGQACIAID YILVEEQFAP ILIELLKSTV ERLITKPEDM ARILNERQFN
301: RLSGLLEDHK VSRSIVHGGN VDPKTLSIEP TILLNPPLDS DVMTEEIFGP LLPIITVKKI EDSIEFVSSR PKPLAIYAFS TSEPLKQRIV KETSSGSVTF
401: NDAIVQYGLE SIPFGGVGQS GFGQYHGKYS FEMFSHKKAV FRRSFLVEFM FRYPPWNDDS KLGMLRHVFR YDYVSLFLAL LGLRR
001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR
Arabidopsis Description
ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.