CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36250.1	KRG89812	AT2G41090.1	17360592
AT4G36250.1	KRG94975	AT2G41090.1	17360592
AT4G36250.1	KRH18664	AT2G41090.1	17360592
AT4G36250.1	KRG89812	AT2G41100.1	17360592
AT4G36250.1	KRG94975	AT2G41100.1	17360592
AT4G36250.1	KRH18664	AT2G41100.1	17360592
AT4G36250.1	KRH31638	AT4G14640.1	17360592
AT4G36250.1	KRH69070	AT4G14640.1	17360592
AT4G36250.1	KRG89812	AT5G21274.1	17360592
AT4G36250.1	KRG94975	AT5G21274.1	17360592
AT4G36250.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08130	Soybean	cytosol	93.81	85.85
VIT_04s0023g02810.t01	Wine grape	cytosol	72.58	71.4
Solyc02g084640.2.1	Tomato	cytosol	68.45	67.89
PGSC0003DMT400009314	Potato	cytosol	68.45	67.89
CDX75566	Canola	cytosol	57.94	64.6
Bra011674.1-P	Field mustard	cytosol	63.51	64.03
CDX77447	Canola	cytosol	63.09	63.62
CDX69216	Canola	cytosol	62.89	63.41
Bra017753.1-P	Field mustard	cytosol	62.47	62.6
CDX72584	Canola	cytosol	62.27	62.4
CDY59717	Canola	cytosol	62.27	62.4
CDY35463	Canola	cytosol	62.27	61.89
AT4G36250.1	Thale cress	cytosol	61.65	61.78
CDY24790	Canola	cytosol	61.65	61.27
Bra010553.1-P	Field mustard	cytosol	57.53	59.74
GSMUA_Achr8P11740_001	Banana	cytosol	57.73	59.2
KRH23132	Soybean	cytosol	57.53	56.48
KRH10203	Soybean	cytosol	56.49	55.47
TraesCSU01G066700.2	Wheat	cytosol	54.23	55.25
TraesCS2A01G388900.1	Wheat	cytosol	55.67	54.88
TraesCS2B01G406900.1	Wheat	cytosol	55.67	54.88
TraesCS6D01G222000.1	Wheat	cytosol	54.43	54.77
Zm00001d017418_P001	Maize	cytosol, mitochondrion	50.1	54.48
OQU82042	Sorghum	cytosol	55.67	54.44
KRH29710	Soybean	cytosol	55.26	54.25
KRH24704	Soybean	cytosol	55.26	54.25
HORVU6Hr1G061220.6	Barley	cytosol	54.23	54.23
TraesCS6A01G239600.1	Wheat	cytosol	53.81	54.15
HORVU2Hr1G092540.1	Barley	extracellular, vacuole	9.9	53.93
TraesCS6B01G284900.1	Wheat	cytosol	53.81	53.81
TraesCS6B01G284600.1	Wheat	cytosol	53.2	53.31
EES05817	Sorghum	cytosol	53.4	53.29
TraesCS6D01G222300.1	Wheat	cytosol	52.78	52.89
TraesCS6A01G240000.1	Wheat	cytosol	49.48	52.86
Os02t0646500-01	Rice	plasma membrane	52.99	52.77
Os04t0540600-01	Rice	cytosol	54.23	52.71
CDY20864	Canola	extracellular	12.16	51.75
Zm00001d025958_P001	Maize	cytosol	54.02	51.57
TraesCS2D01G386700.1	Wheat	cytosol, plastid	55.88	51.13
Os02t0647900-01	Rice	cytosol	50.31	49.69
CDY21568	Canola	cytosol	9.9	49.48
KRH64661	Soybean	cytosol	47.01	46.72
KRH17967	Soybean	endoplasmic reticulum	47.22	46.17
KRH16375	Soybean	endoplasmic reticulum, extracellular	47.22	46.17
KRH53251	Soybean	cytosol	45.98	45.42
HORVU6Hr1G061270.3	Barley	golgi, mitochondrion, peroxisome	53.2	44.79
HORVU2Hr1G092530.1	Barley	peroxisome	43.92	43.47
KRH40972	Soybean	plastid	45.36	40.67
HORVU4Hr1G041570.1	Barley	plastid	19.18	34.7

Protein Annotations

EntrezGene:100809812	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	EMBL:ACUP02000729	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:GLYMA_02G051500	GO:GO:0003674
GO:GO:0003824	GO:GO:0004030	GO:GO:0006081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	UniProt:I1JCK5	InterPro:IPR016162	InterPro:IPR016163
EnsemblPlants:KRH69828	ProteinID:KRH69828	ProteinID:KRH69828.1	PFAM:PF00171	PIRSF:PIRSF036492	PANTHER:PTHR43570
PANTHER:PTHR43570:SF17	SUPFAM:SSF53720	UniParc:UPI0002337074	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:4665410..4670463

Molecular Weight (calculated)

54123.0 Da

IEP (calculated)

7.768

GRAVY (calculated)

-0.008

Length

485 amino acids

Sequence
(BLAST)

001: MDIGGGVEEP VRELRQYFKT GKTKSVTWRK NQLTSLIDLV HENEDAIFKA LHKDLGKHPV EAYRDEVGGV EKSASKALSC VEKWMAPKKS DIPFLFFPAK
101: GEVLSEPLGV VLIISSWNFP IILALDPIIG AISAGNVVVI KPSEQAPACS SFLANTIPRY LDSNAIKVIE GGEDVCEQLL RQKWDKIFFT GSPRVASVVM
201: SAAAKNLTPV TLELGGKCPA ILDSLPNPSE FELAVKRIVG GKWGPCSGQA CIGIDYLLVE EKFSSAVIKL LKKFIRRFYG ENPVESKVIS RIINKQHFER
301: LCNLLKDPLV AASIVHGGSV DEENLFIEPT ILLDPPLDSE IMAEEIFGPL LPIITLDKIQ ESIEFINAKP KPLAIYAFTK DETFKRKILS ETSSGSVVFN
401: DTMVQFLCDT LPFGGVGQSG LGRYHGKYSF DTFSHEKAVM HRKLFLEIEP RYPPWNKFKL EFIRLAYRLN YFGLVLHMLG LKRYN

Best Arabidopsis Sequence Match ( AT4G36250.1 )
(BLAST)

001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR

Arabidopsis Description

ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.